Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02407 ATGAGCACGCCGAGCCAAGTGACGGTGAGAGACCTCGTAGAGGAAGCGAAGAAACGGGTTGTTTTCCTAGTCATATGCGTCGTGGGACTTTCATATCTCATGTCGTtGACTAGCGCCTCAGTATGGGTCAACTTGCCAGCTGCGGCctccttaattattattctccGTTATATATCTTTGGACTttgaaatgaagagaaaagctGCAGCATATAATAACAAACCTGGTTCCACTAGTACTCAGTCTTCAAAGAAACCTCTTGAATTTCCTAAACTTGTTGCTAAGTCTGAGTGGAGAGCTAAAGTCAATTCTCCTGTTGTTGAGGATGCAATAGATCACTTTACCAGGCATCTAGTTTCTGAGTGGGTGATAGACCAGTGGTACTCTCGCTTAACACCAGATAGAGAGGGTCCTGAGGAGTTAGCGCAAATGATAAATGGTGTTCTTGGAGAGATTTCGGGACGCGTTAGGAATATAAATCTGATTGATCTTTTGATAAGGGATCTTATCAACCTCATTTGTACCCACCTGGAGCTATTTCGTGCTGCTCAAGCTAAGATTGAAAAGCAACATTCAGGTTCATTAACAATTGAAAGCCGAGATAGAGAACTAAAACTTGTCTTGGCCACTGAAAACAAATTGCACCCTGCTTTATTTTCTGCGGAAGCTGAGCATAAGGTTTTGCAGCATCTGATGGATGGTCTGATGTCTATCACTTTCAAGCCTGAGGATTTGCAGTGTTCTTTCTTTCGATATATTGCAAGGGAGCTCCTTGCTTGTGCAGTAATGAGACCTATCCTAAACTTAGCTAGTCCAAGATTTATTAATGAAAGAGTTGAATCCATAGTAGTTAATAAGACCAAGGGTAATAAAGGGGCTACAGCAGTTCCAGAGGCGTCTCATTCCAAAGCAGATGCATTGCAGATTTCATCTGACCACTTTTCTAAGTTTTTAGATCCCTCTGTTACTGGTGTTGAGCTTGTCCAGATAAGAAATGGTCACTCTAGAACTTCACAGTCATCTACAAAAGATAATGCCAACGAGAGTTCTCCTAAGGATCCATTGCTTTCAGTGGATACACTATCATCCCGTTCCTGGAGCTCATTGCCCATGAACTCCGAAACTAACGATGACCAACGTATTCAACGATACCGTTCAGGAGGAGAGTGGGGTGATATATTAGATGTTGTTTCACGCAGAAAGACCCAAGCTCTTGCACCTGAACATTTTGAGAATATGTGGACAAAAGGtagaaattacaagaaaaaggaaggagaGAACCAGTCAAGTGAGCAAGTCACAAAGCATTCTATGGGAGGAAAATCATTAATGGCAGATAATATGAAGGCAATTTCTGGACCTAAGGAAAAGGATACAATTTTTAAGCTTAATCCCTCCAAGGGTAGCACTACTAATTCTGGATACAGAAATCAGTTTGCTGTAGAAAACACACCCTTCTGTGCAGACAGAAATGGACTGACTTGCCCTTCAGTTGCCTCAGATcaagatgatgaagaaaacCATTTGCATCTTCCAGTGGTTGATTCAGGGAGCAGTACTTCTTATACGTCTGAAGATGATGAAACTGGCGGTGTTACTGGTCTTGATTCCCCTGGAACTAAAGTTTGGGATGGAAGAACTAACAGAAATCAGGCTGTGTCTCACATTCATCACCCACTTGAAAATATTGATGGTCATAGTACAAAGAAGATGAACAAGAGGCATTCTCGCTATCATAGATTACCTGGAAGTCAATCTGGCTGGAAAAGGTCTAGATCAAGTGGTAATAACTCACATACTTGGCAGGAAGTTGAAAGAACTAGCTTTTTATCTGGAGATGGACGAGACATACTTTGTTCTTCAAAATCACATGCAAGTTCTGAGGACTCTAGTGATGATGctgaaatggaaaatttggGTAGAGTTAATAGTGGAGCAGCAGCTTCATCTTCTGCATCCTTAGTTTCTAAATCAGAATGTTATAGTTTGGTTGATAATTCCTTGAAAAGCTCCTTGGCAGTAGATTCCTTTTTTAAGTTGAGATGTGAGGTTTCTGGTGCAAATATCGTCAAGAGTGGCTCAAAAACCTTTGCTGTTTACTCTGTATCTGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGGCGACTGAAAGAGTTTCCTGAGTATAACCTTCATTTGCCTCCAAAACATTTTCTCTCAACAGGTTTAGACGTACCTGTTATCCTTGAACGGTGTATATTGCTGGACAGATATTTGAAGAAGCTTATGCAGCTTCCAACAGTTTCAGGATCAATTGAAGTATGGGACTTCCTTAGTGTGGACTCTCAGACATActtattcttgaattcattttCTATCGTTGAAACATTATCAGTTGGTCTGAATGATAAACcatttgaaaagaataaaggcACTTCGAATATTTCTGCACCCGCAAGCGATGCTTTTGTCTCACGGAGAGAACATAGCTCTGAGAGCAAGGAGGCTACTTTGCCGATGAAAAATAATGTTGTAGCTGATAGATTAAGGTCAAAAGTAAATGGCATGCCTCTTTCACCCCAAAAGGGGGTTGTAAAAGAATCTAAGAAGTCCCTTGACAATGCCGGCAACAAACCAGCGTCTTCCGATAACATGCAAACTACTGttaaaggaagagagactGATAGTTTGGGGGTGTCTGATTTGCTCCATGACACTTCTTCCAATACTCTTCCCACTGAGTGGTTACCGCCTAATTTGAGTTTACCCATATTGGATCTGGTTGATGTTATCTTCCAGTTACAAGATGGTGGATGGATTAGGCGGAAGGCTTTTTGGGTTGCTAAACAGGTCTTGCAACTGGGCATGGGTGATGCCTTTGATGATTGGTTGATAGAGAAAATCCAGCTTCTCCGCAAGGGATCAGTGATTGCTTCTGGGGTCAAGAGAGTTGAGCAAATACTCTGGCCCGATGGAATATTTATAACCAAGCATCCGAAGCGTCGGCCACCACCACCATCTAGCCCATCCCAGAATTCACCTCATGGCCAACAACCTACAGAAGTATGTTCTCCTAGGATAGATGATGAAAAACAACGGGAGGCAGATCGACGTGCAAAGCTTGTATACGAGCTGATGATTGATCATGCGCCAGCAGCTATTGTAGGTCTTGTTGGTCGCAAGGAATATGAACAGTGTGCCAGGgatctctatttttttcttcagTCATCTGTTTGCCTGAAGCAGCTGGCTTTTGACCTTCTGGAGCTGCTACTGTTATCAGCATTTCCAGAACTAGAACATGTAATCAAGCAGCTGCATGAAGAAAAGCAGAAATTCGGTGACTTAGAAGAAAAGTG 3374 0.4016 MSTPSQVTVRDLVEEAKKRVVFLVICVVGLSYLMSLTSASVWVNLPAAASLIIILRYISLDFEMKRKAAAYNNKPGSTSTQSSKKPLEFPKLVAKSEWRAKVNSPVVEDAIDHFTRHLVSEWVIDQWYSRLTPDREGPEELAQMINGVLGEISGRVRNINLIDLLIRDLINLICTHLELFRAAQAKIEKQHSGSLTIESRDRELKLVLATENKLHPALFSAEAEHKVLQHLMDGLMSITFKPEDLQCSFFRYIARELLACAVMRPILNLASPRFINERVESIVVNKTKGNKGATAVPEASHSKADALQISSDHFSKFLDPSVTGVELVQIRNGHSRTSQSSTKDNANESSPKDPLLSVDTLSSRSWSSLPMNSETNDDQRIQRYRSGGEWGDILDVVSRRKTQALAPEHFENMWTKGRNYKKKEGENQSSEQVTKHSMGGKSLMADNMKAISGPKEKDTIFKLNPSKGSTTNSGYRNQFAVENTPFCADRNGLTCPSVASDQDDEENHLHLPVVDSGSSTSYTSEDDETGGVTGLDSPGTKVWDGRTNRNQAVSHIHHPLENIDGHSTKKMNKRHSRYHRLPGSQSGWKRSRSSGNNSHTWQEVERTSFLSGDGRDILCSSKSHASSEDSSDDAEMENLGRVNSGAAASSSASLVSKSECYSLVDNSLKSSLAVDSFFKLRCEVSGANIVKSGSKTFAVYSVSVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVILERCILLDRYLKKLMQLPTVSGSIEVWDFLSVDSQTYLFLNSFSIVETLSVGLNDKPFEKNKGTSNISAPASDAFVSRREHSSESKEATLPMKNNVVADRLRSKVNGMPLSPQKGVVKESKKSLDNAGNKPASSDNMQTTVKGRETDSLGVSDLLHDTSSNTLPTEWLPPNLSLPILDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPKRRPPPPSSPSQNSPHGQQPTEVCSPRIDDEKQREADRRAKLVYELMIDHAPAAIVGLVGRKEYEQCARDLYFFLQSSVCLKQLAFDLLELLLLSAFPELEHVIKQLHEEKQKFGDLEEK 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02407 1124 ProSiteProfiles PXA domain profile. 104 287 IPR003114 -
Bva02g02407 1124 SMART PX_2 676 786 IPR001683 GO:0035091
Bva02g02407 1124 Pfam PX domain 709 786 IPR001683 GO:0035091
Bva02g02407 1124 MobiDBLite consensus disorder prediction 560 606 - -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 586 606 - -
Bva02g02407 1124 Pfam Sorting nexin C terminal 944 1082 IPR013937 -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 1000 1037 - -
Bva02g02407 1124 SUPERFAMILY PX domain 679 787 IPR036871 GO:0035091
Bva02g02407 1124 MobiDBLite consensus disorder prediction 810 894 - -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 333 377 - -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 513 530 - -
Bva02g02407 1124 Gene3D - 678 791 IPR036871 GO:0035091
Bva02g02407 1124 SMART PXA_3 99 287 IPR003114 -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 333 379 - -
Bva02g02407 1124 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 5 1121 - -
Bva02g02407 1124 Coils Coil 1104 1124 - -
Bva02g02407 1124 Pfam PXA domain 104 281 IPR003114 -
Bva02g02407 1124 ProSiteProfiles PX domain profile. 678 790 IPR001683 GO:0035091
Bva02g02407 1124 MobiDBLite consensus disorder prediction 511 542 - -
Bva02g02407 1124 MobiDBLite consensus disorder prediction 879 894 - -
Bva02g02407 1124 PANTHER PX SERINE/THREONINE KINASE PXK 5 1121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02407 Bva-Chr2 23356778 23364052 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02407 K17925 - gmx:100778731 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02407 02 23356778 23364052 Bva02g02407 02 23356778 23364052 ECH