Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02397 ATGGTTCGAGCAACGGAACAAGAGCAGGAAAGTCAGAAGTCCAgacttttcaatttcaaagggATCTTTGATGGTGGAGGGAGACATACAAAGAGTCTGAGCGTTGAGAGTTCTAGTCAATTAGAAACTAAAGAAGATGATACAGCATCAACAAGAATTCAAGGATCAAAATCTCTAAATGAGCCTTCAAAGACAAACTTAAtgaccaaagaagaaaaagaacttgCAATCAAGGAAGTCAAAGAGAAGCTAACGCAAGAAATGGATCAGATGAAGGAGAGATTTGCAAAACTGCTATTGGGTGAGGATATGTCTGGTGGTGGAAAGGGTGTTCCTTCTGCTTTGGCATTGTCAAATGCATTTACAAACCTTGCTGCTTCTATTTTTGGTGAACAGCGACGCCTAGAGCCAATGCCagcagaaagaaaacaaagatggagaaaagaaattgattggCTCCTTTCAGTGACTGATTACATTGTTGAAATGGTCCCTCAATACCAAAAATCTAAGGATGGCTCCAGCATGGAGGTTATGACAACACGGCAGCGAATTGATCTGCACATGAATATTCCAGCCTTACGCAAACTTGATGCAATGCTTATTGATTGTCTAGATAACTTCAAAGGTGAACAAGAATTCTATTATGTATCAAAAGATTCTGATAATGCAGATAAAGATACAAATAGAGCGAGTAATGACGATAAGTGGTGGATACCTACACCTAAAGTTCCCCCAAATGGTCTTTCTGACGATGCAAGAAAATTTCTGCAATATCAGAAAGATTGTGTGAACCAAGTGCTTAAAGCAGCTATGGCAATAAATGCTCAGGTTATATCAGAGATGGATATCCCGGAAAGCTACATTGAATCCCTACCAAAGAATGGGAGAGCGAGTCTAGGGGATTCAATCTACCGGAGTATTAcagttgaattttttgatCCTGACCAATTCCTTTTAACTATGGACTTATCTTCAGAACATAAAATTCTCGATCTCAAGGACAGAATGGAGGCATCTATAGTGATTTGGAAACGCAAGATGAACCAAAAAGACGGAAAATCAGGTTGGGGTTCTGGAGTGAGTATGGAAAAGAGAGAACTTTTTGAAGAGAGAGCTGAAACCATCTTACTCCTCTTAAAGCAACGTTTCCCAGGGATCCCTCAATCAGCATTAGACATAAGCAAAATCCAATTCAACGGGGATGTAGGGCAAGCTGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTGGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTGCACGCAGATCATGCCACACAAAATCCAGCATCAGGAAAAAGAAGTGGTAAAAGCTCACCCTATGTGAAGTCACCAACTAGAGAAGAGACAGACAAGAGTGGATCAGAAGCTCCCTGTTCCATGACACTATCAGATTTCATGGGATGGACCAATGATCCAGTTGATTCAGAAATCAAGAAGGACTCGACAGATGACTTATGCCAAGACATTGATGCAAATGCAAAGAAAGTTCCAAACATAGTCACCAACAAGAAGACGTCTTACCTTGACAACTTGGGTGGTATGAAAAGTCCAACATCCCGCCATTA 1598 0.3842 MVRATEQEQESQKSRLFNFKGIFDGGGRHTKSLSVESSSQLETKEDDTASTRIQGSKSLNEPSKTNLMTKEEKELAIKEVKEKLTQEMDQMKERFAKLLLGEDMSGGGKGVPSALALSNAFTNLAASIFGEQRRLEPMPAERKQRWRKEIDWLLSVTDYIVEMVPQYQKSKDGSSMEVMTTRQRIDLHMNIPALRKLDAMLIDCLDNFKGEQEFYYVSKDSDNADKDTNRASNDDKWWIPTPKVPPNGLSDDARKFLQYQKDCVNQVLKAAMAINAQVISEMDIPESYIESLPKNGRASLGDSIYRSITVEFFDPDQFLLTMDLSSEHKILDLKDRMEASIVIWKRKMNQKDGKSGWGSGVSMEKRELFEERAETILLLLKQRFPGIPQSALDISKIQFNGDVGQAVLESYSRILESLAFTVLSRIEDVLHADHATQNPASGKRSGKSSPYVKSPTREETDKSGSEAPCSMTLSDFMGWTNDPVDSEIKKDSTDDLCQDIDANAKKVPNIVTNKKTSYLDNLGGMKSPTSRH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02397 532 ProSiteProfiles PRONE domain profile. 78 443 IPR005512 GO:0005085
Bva02g02397 532 MobiDBLite consensus disorder prediction 438 453 - -
Bva02g02397 532 Gene3D PRONE domain, subdomain 1 92 434 - -
Bva02g02397 532 Coils Coil 70 101 - -
Bva02g02397 532 MobiDBLite consensus disorder prediction 434 468 - -
Bva02g02397 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 12 6 532 - -
Bva02g02397 532 Gene3D PRONE domain, subdomain 2 283 399 - -
Bva02g02397 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 437 IPR005512 GO:0005085
Bva02g02397 532 MobiDBLite consensus disorder prediction 1 66 - -
Bva02g02397 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 6 532 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02397 Bva-Chr2 23321559 23324716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02397 - - gmx:100781787 777.319