Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02393 ATGGCTTCCATCATTGCAAACTTATCGCCGCCATTTCTGGTCCGTGGAAGAAAATCTTTTCTTGGGAACTTCCAAAGCTCCCCTGTTGGTCTTAACACAGAGAAACAGAATCGTGTGGGTTTTGTAGTAAAGGCTTCTGGCGAAAGCTCTGAATCTTCAACTTCCATTACTGTTGTCAAGCCCACGAGaTTGAAGATGGCGTGGTTTAGTGGGAAAAATTCTTGGGGGAACTTCCCTGATTTGGCGGGAGCGGTGAATAAGCTTCAGGAGAGTGTCAAGAgtattgaaaagaattttgatagTGCTCTTGGGTTCGAAGAGAAGTCTGAATCCAGCAATGAAGCTGCAGGATCATGGCCCACGGCTATGGAGAGGAAAACCCTATTTAATCCTGTTATGGCCTTTATGGGCAATAAAATTGAGGAAAGGACTGAAGAATCATATGGGAAACTTGAGGCTTCTCAACAGGAATCTGAAACTGAGACATCACGGGAAACAGCTAAGTCTCCTGATGATCTACCCATAGATGAGGGAAAAGAAGGCTTTGAAGGTCAGAAGGTAGCCGATACTGAAGCTGAAGAAAATACTGCTCAAGATGAAAATGTAGTGCTTAAGGTAGAGGAAAACAATGAACACTTAGAATCAGCAGATGGAACAGCTATGATAAATTCAGACcatgaaaaaatagaagaccGATTACCCTTTGTTCCTGTTGAATCACCTGAATCCACTGTCCAGAATGTTGAGAGTTCAGTTTCTGGTGACAGTGCAGAGAACGAGACTTCTGAAGTGGTAACCAAAGAAAGTCCTGTGTCAGTGCAAGCCAAACTTGTTAATCCTGGGGAGGATCAAGTTGAGGTTACTATGAGTGAGCCAGGTGATTCACATGGTGTTACTGATGTGCAAgagaattttgaaatgaagACTGAAGAAGAGAGCTGGCAAGTAGAAGATAGTGTACAGATAGTTTCTCCTGCTCAACCCGAGCCATCAAGTGATAGTGAGTGCAGAGATGTTGTTAAgccttatattttaaattctgttGCTACTGAGGAAGCTAATAGTGCTGGTCAATCATATAATGAACGCATGTCCAATGATAGTCCATCAAATGAGTCTTCTGAGGTGGTTTCTGAGTTGGATTTGCATGAAAGGGATGCAACtgtcaaagaaaatgaaggagaTCAAGAGGATGTTGAAACTGACATCAAAGAGCTGCCTCTGAGTTCTGTAAAAAATATGCCTGACTCAGAATATGTGCTTGAACTGGAGAGAGCGAAGATGGAGGTGAAAATGATGGAAACTGCACTACAAGGTGCTGCAAGACAGGCTCAGGCTAAAGCTGATGAGATTGCAAAATTGATGAACGAAAATGAACAACTAAAAGCTGTGATTGAGGATTTAAAGAGGAAATCTAATGAGGCAGAAGTTGAGTCTTTACGTGAGGAATACCATCAGAGGGTTGCAACTCTTGAGAGAAAGgtgTATGCTCTCACAAAGGAAAGGGATACACTTCGACGTGAACAGAGTAAAAAAAGTGATGCAGCTGCTCTATTGAAGGAAAaggatgaaataattaatcaagttATGGCAGAAGGTGAAGAGCTTTCCAAAAAGCAAGCTGCTCAGGAATCTACTATTAGGAAACTGAGGGCTCAGATTAGAGAGCTTGAGGAGGAGAAGAAAGGTTTGACTACTAAACTTCAGGTGGAGGAGAATAAAGTGGAAAGTATCAAGAGGGACAAGACTGCTACAGAGAAGTTGCTGCAAGAAACAATGGAGAAACATCAAACAGAACTTGCTGCACAGAAAGAATATTATTCCAATGCTTTGGTTGCTGCTAAGGAGGCTGAAGCATTAGCAGAGGCTCGGGCCAACAATGAGGCCAGATCTGAACTTGAGTCTCGCTTAAGAGAGGCTGAGGAACGCGAGTCTATGCTGGTCCAGGCACTAGAAGAATTGAGACAAACATTAAGTAGAAAGGAACAACagGCAGTATTTAAAGAAGACATGCTTCGAAGGGACATTGATGATCTTCAAAAGCGTTATCAGGCAAGTGAAAGGCGATGTGAAGAATTGATCACACAAGTTCCAGAATCCACAAGGCCGCTTCTGAGGCAAATTGAAGCTATGCAGGAAACAAATGCTAGAAGGGCCGAAGCTTGGGCTGCTGTTGAGAGAACCCTGAATTCTCGACTTCAGGAATCAGAAGCAAAAGCCGCAGCTGCTGAGGAAAGAGAGCGATCCATGAATGAACGCTTATCCCAAACCTTATCACGAATTAATGTCCTTGAGGCTCAGATTTCATGCCTCAGAGCAGAACAAACTCAGTTAAGTAAGTCCCTTGAAAAGGAGAGACAGAGGGCAGCTGAAAATAGGCAGGAATACCTTGCGGCGAAGGAGGAAGCTGACACACAAGAAGGTCGTGTGAAACAgcttgaagaagaaattaggGAACTTAGGCAGAAACACAAGCAGGACTTACAAGAGTCATTGGTTCATAGGGAACTTCTAGAGCAGGAGATAGAAAGGGAAAAGGCTGCTCGATTGGATTTGGAGAGGACTGCTCGTGTTCATTCTACTCCATTACCTGATCAAACTCCTCGAGTGAAGCAAAATTCTGCTTTTGAGAATGGGAACTTGTCTCGGAAAGTCTCTAGTGCAAGCTCCCTTGGGAGCATGGAAGAAAGCTACTTCCTGCAAGCATCATTGGACTCATCTGACAGTTTCTCTGAGAAGAGGAATACTGGAGAGCCAATCATGAGTCCGTACTATTTGAGGAGCATGACACCTAGTGCTTTTGAAGCTGCACTTCGCCAAAAAGAGGGTGAACTTTCTTCATATATGTCACGTTTGGCATCAATGGAATCTATACGCGACTCACTTGCTGAGGAGTTGGTCAAAATGACAGCACAATGTGAAAAGTTACGCACTGAGGCTGCCACGTTGCCTGGCTTACGAGCAGAGCTAGAAGCACTGAGGAGGAGGCACTCTGCTGCTTTGGAGTTAATGGGTGAACGTGACGAGGAGCTCGAGGAACTTCGTGCGGATATCATGGACATGAAGGACATGTACAAAGAGCAAGTCGACTTGCTTGTGAATAAGATCCAGATATTGAGTTCATCAATGAGCACTACAGAACAGAGGTACTTAATAGAGTCTGTGCGAAGATACTCTCTTGCGAGCTTTAGAGAAGGTTTATATCGTTTTGCCATGCGGGGGAGGCATAATGATCCGTACAAACGAGCGGGATCCAGGGATCATATACTTGCATATGATACAGAAGAAAATCTAGCTTCTGCACGCTTACTGAATAGCAAACCACCTTGGCGGCGCTCTCTGAGGCATGTGCTAGTCGCTTCACTCTCCTCATTCTTATTTGGATACCATCTTGGGGTAGTCAATGAAACCCTAGAGAGCATTTCCTTAGACCTTGGATTTAGTGGGAATACCATTGCTGAAGGAGGTGCTTTTGTTGGGTCTCTATTCAGTGGCTACATTGCAGATGGGGTTGGGCGTAGAAGGGGTTTTCAGTTGTGTGCTTTGCCTATGATCATCGGGGCATCAATGAGTGCAACAACAAAAAGCCTGTGGAATATGCTACTGGGAAGGATATTTGTTGGCACCGGGATGGGACTTGGTCCACCTATTGCAGCTCTTTATGTGGCTGAGGTTTCACCTCCATCTGTAAGGGGTACTTTTGGCAGCTTAACTCAGATTGCAACATCTCTTGGTCTTATGAGCGCTCTCTTTATAGGATTCCCAGCCAAGGAAATAGTGGGTTGGTGGCGGATTTGTTTTTGGGTATCAGCCATTCCTGCTGCTATTCTGGCCCTTTCAATGGAGTTCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAGAGAAAGAGGTGCTGAAGCTGAAGCTGAATTCGAGAAGCTCTGGGGTGGGATACATGTGAAATCTGCAATGGTTGAGTTGTCAAAGTCTGACAGAGGAGATGAGTCCGACACAGTGAAACTCTCAGAATTAATCTATGGCCGCCATTTCAAGgTGGTTTTCATTGGATCTACCCTTTTTGCTTTCCAACAGCTCTCTGGCATAAATgctgttttctatttttcctcaACCGTCTTTAAAAGCTTTGGTGTACCATTAAATCTTGCAAACACATGTGTTGGAATTTGCAATTTATTTGGGTCAGTAATTGCAATGATTCTGATGGATAAACTTGGAAGAAAAGTCCTTCTCTTGGGGAGTTTTTTGGGAatgGCAGTGTCGATGGGTCTGCAAGTGATTGCTGCAAGTTCTTTTGCATCAGGATCTGCAGCAATGTATCTTTCTGTTGGGGGCATGTTGCTGTTTGTACTTACGTTTTCTCTGGGTGCTGGTCCAGTTCCCAGTCTCCTCCTATCAGAAATACTCCCTGGCAGGATTAGAGCAAAGGCAATGGCAATTTGCATGGCTGTGCATTGGATTATAAACTTCTTTGTTGGTCTACTATTTTTGCGCTTGCTGGAGCAAATGGGGGCAAAATTCCTCTATACCATCTTCGGTTCATTCTGTTTGGTGGCAGTGCTTTTTGTGAATAAAAATGTTGTGGAAACGAAAGGGAAGTCACTCCAAGAAATTGAGATTGCATTACTTCCAcaagaagcaaaata 4643 0.4267 MASIIANLSPPFLVRGRKSFLGNFQSSPVGLNTEKQNRVGFVVKASGESSESSTSITVVKPTRLKMAWFSGKNSWGNFPDLAGAVNKLQESVKSIEKNFDSALGFEEKSESSNEAAGSWPTAMERKTLFNPVMAFMGNKIEERTEESYGKLEASQQESETETSRETAKSPDDLPIDEGKEGFEGQKVADTEAEENTAQDENVVLKVEENNEHLESADGTAMINSDHEKIEDRLPFVPVESPESTVQNVESSVSGDSAENETSEVVTKESPVSVQAKLVNPGEDQVEVTMSEPGDSHGVTDVQENFEMKTEEESWQVEDSVQIVSPAQPEPSSDSECRDVVKPYILNSVATEEANSAGQSYNERMSNDSPSNESSEVVSELDLHERDATVKENEGDQEDVETDIKELPLSSVKNMPDSEYVLELERAKMEVKMMETALQGAARQAQAKADEIAKLMNENEQLKAVIEDLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQSKKSDAAALLKEKDEIINQVMAEGEELSKKQAAQESTIRKLRAQIRELEEEKKGLTTKLQVEENKVESIKRDKTATEKLLQETMEKHQTELAAQKEYYSNALVAAKEAEALAEARANNEARSELESRLREAEERESMLVQALEELRQTLSRKEQQAVFKEDMLRRDIDDLQKRYQASERRCEELITQVPESTRPLLRQIEAMQETNARRAEAWAAVERTLNSRLQESEAKAAAAEERERSMNERLSQTLSRINVLEAQISCLRAEQTQLSKSLEKERQRAAENRQEYLAAKEEADTQEGRVKQLEEEIRELRQKHKQDLQESLVHRELLEQEIEREKAARLDLERTARVHSTPLPDQTPRVKQNSAFENGNLSRKVSSASSLGSMEESYFLQASLDSSDSFSEKRNTGEPIMSPYYLRSMTPSAFEAALRQKEGELSSYMSRLASMESIRDSLAEELVKMTAQCEKLRTEAATLPGLRAELEALRRRHSAALELMGERDEELEELRADIMDMKDMYKEQVDLLVNKIQILSSSMSTTEQRYLIESVRRYSLASFREGLYRFAMRGRHNDPYKRAGSRDHILAYDTEENLASARLLNSKPPWRRSLRHVLVASLSSFLFGYHLGVVNETLESISLDLGFSGNTIAEGGAFVGSLFSGYIADGVGRRRGFQLCALPMIIGASMSATTKSLWNMLLGRIFVGTGMGLGPPIAALYVAEVSPPSVRGTFGSLTQIATSLGLMSALFIGFPAKEIVGWWRICFWVSAIPAAILALSMEFCAESPHWLFKRERGAEAEAEFEKLWGGIHVKSAMVELSKSDRGDESDTVKLSELIYGRHFKVVFIGSTLFAFQQLSGINAVFYFSSTVFKSFGVPLNLANTCVGICNLFGSVIAMILMDKLGRKVLLLGSFLGMAVSMGLQVIAASSFASGSAAMYLSVGGMLLFVLTFSLGAGPVPSLLLSEILPGRIRAKAMAICMAVHWIINFFVGLLFLRLLEQMGAKFLYTIFGSFCLVAVLFVNKNVVETKGKSLQEIEIALLPQEAK 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02393 1547 PANTHER GOLGIN CANDIDATE 5 66 1044 - -
Bva02g02393 1547 Pfam TATA element modulatory factor 1 DNA binding 514 585 IPR022092 -
Bva02g02393 1547 Coils Coil 726 855 - -
Bva02g02393 1547 TIGRFAM SP: MFS transporter, sugar porter (SP) family 1117 1537 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 Coils Coil 1011 1031 - -
Bva02g02393 1547 Coils Coil 623 696 - -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 316 331 - -
Bva02g02393 1547 PRINTS Sugar transporter signature 1124 1134 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 PRINTS Sugar transporter signature 1201 1220 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 PRINTS Sugar transporter signature 1465 1477 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 PRINTS Sugar transporter signature 1356 1366 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 PRINTS Sugar transporter signature 1442 1463 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva02g02393 1547 Coils Coil 423 508 - -
Bva02g02393 1547 SUPERFAMILY MFS general substrate transporter 1103 1538 IPR036259 -
Bva02g02393 1547 ProSitePatterns Sugar transport proteins signature 1. 1397 1413 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva02g02393 1547 MobiDBLite consensus disorder prediction 352 376 - -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 301 315 - -
Bva02g02393 1547 Coils Coil 540 595 - -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 240 273 - -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 352 410 - -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 377 394 - -
Bva02g02393 1547 Gene3D MFS general substrate transporter like domains 1111 1541 IPR036259 -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 235 338 - -
Bva02g02393 1547 Coils Coil 959 979 - -
Bva02g02393 1547 Pfam TATA element modulatory factor 1 TATA binding 932 1031 IPR022091 -
Bva02g02393 1547 MobiDBLite consensus disorder prediction 143 179 - -
Bva02g02393 1547 CDD MFS_GLUT_like 1119 1528 - -
Bva02g02393 1547 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1116 1530 IPR020846 GO:0022857
Bva02g02393 1547 Pfam Sugar (and other) transporter 1117 1539 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva02g02393 1547 ProSitePatterns Sugar transport proteins signature 1. 1164 1181 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02393 Bva-Chr2 23288187 23305056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02393 1080 1486 Organic Solute Cotransporters AT1G67300 66.903 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02393 K20286 - gmx:100785153 1273.84