Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02386 ATGGCTACCTTTTTGCACCAAAATCCCACTTTCCTTAAACCCCACCCTTCTCTACCAACAAGACCATCCACGCCTTCTAGCTATTTTCCGATACGGTGCGGTAGTGGCCCACGATCCCAGCGTGGACCTCTCGTCAAAGGACGAATCCTGAGCATCGAAGCAATCCAAGCCGTTCAATCCCTGAAACGCCTTCAGAGAACGAACCCCACCGATCTTCCTCAACTGATTTCCAACACCCTCTCTCGTCTGATCAAATCCGACCTCTTGGCCGCTCTGAAGGAGCTCCTACGGCAGGACCAGTGCTCCCTAGCACTCCAAGCATTTTCCGTCTTCCGATTAGAGTACAAGCCGGATTTGTCCCTGTACGCTGAGATGGTGCAGGCGCTTGCCAGGAGTGGGATGGCAGAGGATGTGGACCGTGTGATCCTTGATATGGAGGGAATTGATTGCGAAGATAAAGggcttataaatttaatcaaggCTGTGATTGGAGCTAACAGGCGGGAATCAACGGTCAGGATTTACGGGTTGATGAAGGAAGGTGGATGGGGGTCCACGGTTGAGCCAGATGAATATGTGGTTAAGGTTTTGAGCAAGGGCTTCAAGAGTTTCGGGGAACAGGATCTGGCTGAGGAAGCTGAAAGTGAATACGAAAGGGCATTTACGAGGCAGTTCCCTAAAACCCAAAATGGATTAAAACTGAACAGAGGGAAACTTGAGCATCCTCATCCCTCTCTCTCAAACCCTATCATGCACAGAGAAAGGCAAGCAActtcatcatcatcgtcaACAGCGGCAATGAATAGCGGTGGTCTCCCACCATCACCAAATGCTTGGCTTGATACTTCCCACAAGTTGCTGCCTCACTGGGaatctttttccctttctcatCAGTCATCCATCCCAATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCAAGATTGGACGTTGAAATGTCGGCCATGCTGAAAGAACAGTTGGTTAAAGTCTTCTCTTTAATGAAGCCAGGAATGTTATTCCAGTATGAAGCCGAGCTTGATGCTTTCCTTGAGTTTCTTATATGGCGATTCTCAATTTGGGTAGATAAGCCAACTCCAGGCATTGCTCTCATGAACTTGAGATATAGGAATGAGCGTGCAATGGAATCAAGAGAAAAAGTCAGAACTGGACCGGAGGGACCTGGACTCTCTGTTGCTCAGAAGATTTGGTACTGTGTTGCTACTGTTGGTGGTCAGTATATCTGGGCTCGTTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATTCTTTGCAGAGGTCTTTGGCACGACGAGCATGGATCTTGATACAACGTATAGAAGGAATTTATAGAGCTGCTTCATTTGGCAATCTGTTGATATTTCTTTGCACTGGAAGTTACAGAAATCTTATTGAAAGAGCTTTGCGAGCCAGGCTTGTGTATGGGAGCCCAAATATGAATCGTTCTGTTAGCTTTGAGTACATGAACCGGCAGTTAGTTTGGAATGAATTCTCTGAAATGTTGTTATTACTTCTTCCGCTCCTTAACTCATCGTCTGTGAGAAATCTCCTGGGACCATTTTCTAAGGATAAATCTTCAAGTTCTGGCAGAGATGAGGGTGCTTGCCCGATTTGCCAGGCGACTCCAACCATTCCGTTTGTTGCTCTCCCTTGTGAGCACAGATACTGCTACTATTGTCTTCGAACAAGATGTGCTGCCGTTCCATCGTTTAGATGTTCCAGGTGCGGTGAAGCTGTGGTTGCCATGCAGCGGTGTCACCAAGGAATGACCTTTACAAGAGTGGAATA 1811 0.4572 MATFLHQNPTFLKPHPSLPTRPSTPSSYFPIRCGSGPRSQRGPLVKGRILSIEAIQAVQSLKRLQRTNPTDLPQLISNTLSRLIKSDLLAALKELLRQDQCSLALQAFSVFRLEYKPDLSLYAEMVQALARSGMAEDVDRVILDMEGIDCEDKGLINLIKAVIGANRRESTVRIYGLMKEGGWGSTVEPDEYVVKVLSKGFKSFGEQDLAEEAESEYERAFTRQFPKTQNGLKLNRGKLEHPHPSLSNPIMHRERQATSSSSSTAAMNSGGLPPSPNAWLDTSHKLLPHWESFSLSHQSSIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRNERAMESREKVRTGPEGPGLSVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSLQRSLARRAWILIQRIEGIYRAASFGNLLIFLCTGSYRNLIERALRARLVYGSPNMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVRNLLGPFSKDKSSSSGRDEGACPICQATPTIPFVALPCEHRYCYYCLRTRCAAVPSFRCSRCGEAVVAMQRCHQGMTFTRVE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02386 603 CDD RING-HC_PEX2 542 584 - -
Bva02g02386 603 MobiDBLite consensus disorder prediction 231 274 - -
Bva02g02386 603 MobiDBLite consensus disorder prediction 1 26 - -
Bva02g02386 603 ProSitePatterns Zinc finger RING-type signature. 559 568 IPR017907 -
Bva02g02386 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 521 602 IPR013083 -
Bva02g02386 603 Pfam Pex2 / Pex12 amino terminal region 317 520 IPR006845 -
Bva02g02386 603 Gene3D Tetratricopeptide repeat domain 49 221 IPR011990 GO:0005515
Bva02g02386 603 PANTHER - 272 598 - -
Bva02g02386 603 MobiDBLite consensus disorder prediction 251 271 - -
Bva02g02386 603 SUPERFAMILY RING/U-box 539 588 - -
Bva02g02386 603 ProSiteProfiles Zinc finger RING-type profile. 543 583 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02386 Bva-Chr2 23258892 23264014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02386 K06664 - gmx:100805856 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02386 02 23258892 23264014 Bva02g02386 02 23258892 23264014 ECH