Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02350 ATGAATGTATCTCAGAAAAATCAACCACCGCCGCTTACGAACCCATCGATTCTCCGCCTCGCTTTAGGTCTCCCCCTCCCTCCcccatctctttctctctctgctcTGCTTACCGACCGTTGTCCCTATCCCACTGGGATACGTCACCGTTTCCTaTTTGGGACTTCGATTTTCTTTCAACCCTTACTCGTAATAATTCGTTCCGTCGATTTTGTTCCTTTTCCGAAGaaaattcctgAGATGGTGAATTCTAGAGCATTGGGTGCTTCATCACCGCCTTCTCAAGCGCCGACGAAGCAATATGGTGTGACGAAGCCAATATCTATGGCTGGGCCAACGGAAGCTGATATAAAGAGGACTTCGGAGTTAgagaagTTTCTAGCTCGTGCAGGTCTTTACGAGAGCAAAGAGGAAGCTGCCAAGAGAGAAGATGTTCTTGTTCGACTTGGACAGATAGTGAAGAATTGGGTTAAGCAACTTACTCGTCTTAGAGGTTACACAGATCAAATGGTGGAAGATGCAAATGCTGTTATCCTCACTTTTGGTTCTTGTCGTCTTGGGgtCCATGGTCCTGGGGCTGACATAGATGCTTTGTGTATTGGGCCATCATATGTGAACCGGGAGGAGGACTTCTTTTACATATTGCACGATGTACTGGCTAACATGGAGGAAGTCGCTGAACTGCAACCAGTTCCAGATGCTCATGTCCCAGTTATGAAATTCAAGTTTGATGGCATATCAATTGACCTACTTTATGCAAGTATATCTCTCTTGGTTGTACCAGAAGACTTGGATATATCCAACGTGTCTGTTCTACACAATGTTGATGAGCCTACTGTTCGAAGTTTGAATGGCTGTAGAGTTGCAGATCAAATTCTGAAGCTAGTTCCAAATGTTGGGGTCTTCAGAACAACTCTTAGATGCTTAAAGTTTTGGGCCAAAAGACGAGGTGTTTACTCCAATgtgACTGGGTTTCTTGGTGGCGTGAACTGGGCACTTCTTGTAGCTCGAGTCTGCCAGTTGTATCCAAATGCTGTTCCTAGTATGCTTGTCTCTCGATTCTTCAGGGTCTATACACAGTGGCGGTGGCCAAACCCTGTCATGCTATGTCCAATAGAGGAGAATGAGCTTGGGTTTTTAATTTGGGATCCTCGTAAATATCCTCGTGACCGAACACATCATATGCCTATAATTACTCCTGCGTATCCTTGCATGAATTCTAGTTATAATGTCTCAACAAGTACACTTCGTGTCATGATGGAGCAGTTCCAATTTGGCAACAAGATCTGTGGGGAAATAGAACTGAGCAGGGCTCGTTGGGATGCTCTGTTCGAGCCTTACCAGTTCTTTGAAAGCTATAAGAACTATCTGCAAGTTGACATAGTTGCtgctgatgatgatgatttgcGAGCTTGGAAAGGCTGGGTGGAGTCACGACTTCGGCAACTGACTTTGATGATTGAACGTGACACTTTTGGCAAGTTGCAGTGCCATCCTCATCCCCATTATTATGCAGATGCATCAAAGCAATGTGCACATTGTGCTTTCTTTGTGGGCTTGCAGAGGAAGCAGGGTGAGATTGTTCAAGAGGGTCAGCAGTTTGATATACGTGGGACAGTTGATGAATTCAGGCATTCTGTTAATATTTACTCCTTCTGGAAACCTGGGATGGACATATATGTTTCTCACGTTCGTAGAAGGCAAATTCCAACTTATGTTTTTCCAGATGGCCACAAACGATCTCGACTATCAAGGCCAACAGTCCAACACGAGAATCCTGTTAAATCATTTCATGAAGATGAGGTTCCTCAGACTGAACTAGGTGAGGTGAACCGCAAGAGGAAAAATGATGAAGTGGTGGGTATCAAGCATGATGTTACAGCAAAGAGGCAATCTGCTAGTCATGTGAGGCAGGATTCTGTTTCTCCTGATAGCTTCATGTGTCAGTTTCAAATGAGTCAAGTTCGATGTTTGTCTTCCAACCGTTTGACTACTGATCCTGTATCTAATAGTCAAGAGTTGAGAAATATGGATAGCATTAAATTGTCCAATAGGGGGCAAGGTGGGCTGGACAAAGGGATGCAGTCTCCTGAACCAGAGCCTGAATGTGCCTCAAATTCTAGTGTAATTACATCTGTTTCAAGTGATGGTGGTTCTTTTGAGGATGTTGGGTTTGATTCGATGGCAAATGTTAATGCTGATGGTGTTGTGGGTATGGTCAAGGATGGTGATGAGATGGTGTCTTTGCAGGATGTGAGTCATGTGAGATGCAGGGCAGATTCTGTTGCTCTTTCAGAGGATGGAATTGCAAACGGAAATGTAGTACCAGATGAGCTACGGGAACAACTGGAGCCTAATGCTACCCTAGGGATGGTTCTTAATTCTAATAGCAGAGTTCACTCAGAAGCTGTGCAAAAGATGGTGATTAGGAGACTGAGTCTAGCTTCAACAGCGTG 2456 0.4336 MNVSQKNQPPPLTNPSILRLALGLPLPPPSLSLSALLTDRCPYPTGIRHRFLFGTSIFFQPLLVIIRSVDFVPFPKKIPEMVNSRALGASSPPSQAPTKQYGVTKPISMAGPTEADIKRTSELEKFLARAGLYESKEEAAKREDVLVRLGQIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSCRLGVHGPGADIDALCIGPSYVNREEDFFYILHDVLANMEEVAELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISNVSVLHNVDEPTVRSLNGCRVADQILKLVPNVGVFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFLIWDPRKYPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICGEIELSRARWDALFEPYQFFESYKNYLQVDIVAADDDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPHPHYYADASKQCAHCAFFVGLQRKQGEIVQEGQQFDIRGTVDEFRHSVNIYSFWKPGMDIYVSHVRRRQIPTYVFPDGHKRSRLSRPTVQHENPVKSFHEDEVPQTELGEVNRKRKNDEVVGIKHDVTAKRQSASHVRQDSVSPDSFMCQFQMSQVRCLSSNRLTTDPVSNSQELRNMDSIKLSNRGQGGLDKGMQSPEPEPECASNSSVITSVSSDGGSFEDVGFDSMANVNADGVVGMVKDGDEMVSLQDVSHVRCRADSVALSEDGIANGNVVPDELREQLEPNATLGMVLNSNSRVHSEAVQKMVIRRLSLASTA 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02350 818 Pfam Poly(A) polymerase predicted RNA binding domain 448 504 IPR007010 GO:0003723|GO:0043631
Bva02g02350 818 Pfam Poly(A) polymerase predicted RNA binding domain 507 581 IPR007010 GO:0003723|GO:0043631
Bva02g02350 818 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 447 575 IPR011068 GO:0003723|GO:0016779|GO:0031123
Bva02g02350 818 Pfam Poly(A) polymerase central domain 102 446 IPR007012 GO:0004652|GO:0043631
Bva02g02350 818 Gene3D Beta Polymerase, domain 2 134 290 IPR043519 -
Bva02g02350 818 PANTHER NUCLEAR POLY(A) POLYMERASE 4 92 672 - -
Bva02g02350 818 SUPERFAMILY Nucleotidyltransferase 98 295 IPR043519 -
Bva02g02350 818 Gene3D Poly(A) polymerase predicted RNA binding domain 448 564 - -
Bva02g02350 818 Pfam Nucleotidyltransferase domain 175 249 IPR002934 GO:0016779
Bva02g02350 818 PANTHER POLY A POLYMERASE 92 672 - -
Bva02g02350 818 MobiDBLite consensus disorder prediction 85 105 - -
Bva02g02350 818 SUPERFAMILY PAP/OAS1 substrate-binding domain 297 446 - -
Bva02g02350 818 MobiDBLite consensus disorder prediction 682 711 - -
Bva02g02350 818 CDD NT_PAP_TUTase 141 296 - -
Bva02g02350 818 MobiDBLite consensus disorder prediction 87 102 - -
Bva02g02350 818 Gene3D - 102 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02350 Bva-Chr2 23040869 23046676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02350 K14376 - zju:107435341 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02350 02 23040869 23046676 Bva02g02350 02 23040869 23046676 ECH