Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02345 ATGGAGGAAGAAGGAGACGATGCTGAGTTTTCTGAACTTGGCGGTCGCTCCTCTTCTGCTAGTAAAGTTGCCATTAGATGCGCATACTTTGCAGTGAAGAGATGCTTTTCTGTTCCCTCGCTCATTTCATTTCGCACCCTCCAAAACCTTCAATTTTCCCGTCATTCCCACTCCGCCAGTAGTCACCAAGAATATACACCAGAAGAAGTTCAGACAAATTCTAGCTCTCCTATCGGAGATTCTACTTCTATAAGTAGAAAAAGTGGTGCCACTTGGAGTATTTACGGTAATCTCTCTGAATGGTCACCTGAGCAGAGAGATAGCAACAAAAGCAATGAGAAGAGGTTGGAACAGAACGAtggagaagaaaggaaggcCACTCAGTTGTATTGTGATGATAAAGTTGAAGACTTTTTGGAAGAAAGGGCAAATGGGAGAGTGAAGGAGGCGAAACCAGTTCATGATACTGCACAAGCTGTGGGTCTTCGAAATAGGATTGGGACAAAAAAGAAGGCTAAAGGAAAAACGCATTGGGTTTGCTCGAATTGTGGGAATGCTGAGGGGCAATGGTGGGGGATTTGCCGTTCGTGTAACACTGCTGGAACAATGACCGAATTTCATGAGGAGAAATCCACTGGTGCTTCTAAGGTAACTGGTTTTGCGGTTTCTGAGAATGTTGTAGGATCGTGGTTACCTCAACAAGCAGGTGAGGTGCGTCCTTTGAGATTGAGGGACGTGAACAGGGGGTTTAATCAGCAAGACTGGAGAATTCCTCTATACGGTCCTTTTGGAAATGAAGTTTCGAGAGTGCTTGGTGGTGGTCTTGTACCAGgctctttaattttagttgGTGGTGATCCTGGTGTTGGGAAGAGTACACTTTTGCTGCAGattGCTGCGATAATAACAGAAAGACGTGATCGTGGTGAAGCAGGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTCTTGAGCAAATTGGTAATAGAGCAGACCGCCTTGGGATTGAAtcagagaaattatttttatattcaagcACTGATATTGAGGACATACTAGAGAAAATTCAGCACCTTTCCCCTCAGGCTATAGTTCTTGATTCGATACAGACTGTCCATTTGAACGGTGTAATTGGAAGTGCTGGAGGGGTCACGCAGGTGAAGGAATGTACTGCAGCCTTGCTACGATTTGCAAAGAAGACAAACATTCCAATTATTTTGATTGGACATGTGACAAAATCTGGAGAAATTGCAGGACCTCGTCTCTTGGAGCATATTGTTGATGTCGTACTATACATGGAAGGGGAGAAGTGCTCTTCTTATCGTTTGCTTCGACCTGTGAAGAATAGGTTTGGATCCACTGACGAGCTTGGAGTTTTCGAAATGTCACAATCAGGACTCCAGGTGGTTTCAAATGCTAGTGAGATATTTCTCAGTGAGCAGCACTTGGATTCAGAAGTTTTAGCAGGACTGGCTGTTGCTGTAATAATGGATGGGTCTCGAACTTTTCTAATAGAAGTTCAGGCACTTTGTATTTCTGGTTCAACAGTTATGAGGCACGTTAATGGGATCCAAGCAAGTAGAGCTGATATGATTATATCTGTTCTTATGAAGCAAGCTGGTCTTCGTCTCCAAGAAAATGCTGTCTTTTTGAATGTTGTTAGTGGACTGACCCTGACTGAAACAGCTGGAGATCTAGCAGTAGCAGCAGCAATTTGCAGCAGTTTCATGGAGTTTCCTATTCCCAATGACATTGCATTCATTGGCGAAATTGGCCTTGGTGGTGAGCTTCGCGCGGTTCCTAGAATGGAGAAAAGGGTACACACAGTGGCAAAACTGGGTTACAGAATGTGTATTGTCCCGGCGGCagctaagaaaattttaggaaaTGAAGGTTTTGAAAAGATGGAAATTATAGGCTGCAGGAATATTAAAGAGATTCTTTCTATCACTATCGTTGTTGCGCAAAGCTTGGTGCGAGAAACATGTCAACCGGAAAACACTGAAGATGAGGAGAGATA 2018 0.4237 MEEEGDDAEFSELGGRSSSASKVAIRCAYFAVKRCFSVPSLISFRTLQNLQFSRHSHSASSHQEYTPEEVQTNSSSPIGDSTSISRKSGATWSIYGNLSEWSPEQRDSNKSNEKRLEQNDGEERKATQLYCDDKVEDFLEERANGRVKEAKPVHDTAQAVGLRNRIGTKKKAKGKTHWVCSNCGNAEGQWWGICRSCNTAGTMTEFHEEKSTGASKVTGFAVSENVVGSWLPQQAGEVRPLRLRDVNRGFNQQDWRIPLYGPFGNEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAIITERRDRGEAGPVVYVSGEESLEQIGNRADRLGIESEKLFLYSSTDIEDILEKIQHLSPQAIVLDSIQTVHLNGVIGSAGGVTQVKECTAALLRFAKKTNIPIILIGHVTKSGEIAGPRLLEHIVDVVLYMEGEKCSSYRLLRPVKNRFGSTDELGVFEMSQSGLQVVSNASEIFLSEQHLDSEVLAGLAVAVIMDGSRTFLIEVQALCISGSTVMRHVNGIQASRADMIISVLMKQAGLRLQENAVFLNVVSGLTLTETAGDLAVAAAICSSFMEFPIPNDIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYRMCIVPAAAKKILGNEGFEKMEIIGCRNIKELVRETCQPENTEDEER 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02345 661 Pfam Subunit ChlI of Mg-chelatase 534 622 - -
Bva02g02345 661 Gene3D - 266 469 IPR027417 -
Bva02g02345 661 MobiDBLite consensus disorder prediction 58 85 - -
Bva02g02345 661 SUPERFAMILY Ribosomal protein S5 domain 2-like 447 648 IPR020568 -
Bva02g02345 661 MobiDBLite consensus disorder prediction 106 126 - -
Bva02g02345 661 PANTHER DNA REPAIR PROTEIN RADA 108 648 - -
Bva02g02345 661 MobiDBLite consensus disorder prediction 101 126 - -
Bva02g02345 661 Gene3D - 485 660 IPR014721 -
Bva02g02345 661 Pfam AAA domain 270 414 - -
Bva02g02345 661 PANTHER DNA REPAIR-LIKE PROTEINRADA 108 648 - -
Bva02g02345 661 ProSiteProfiles RecA family profile 1. 256 410 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Bva02g02345 661 TIGRFAM sms: DNA repair protein RadA 172 645 IPR004504 GO:0003684|GO:0005524|GO:0006281
Bva02g02345 661 PRINTS DNA repair protein radA signature 515 538 - -
Bva02g02345 661 PRINTS DNA repair protein radA signature 366 390 - -
Bva02g02345 661 PRINTS DNA repair protein radA signature 440 466 - -
Bva02g02345 661 PRINTS DNA repair protein radA signature 405 433 - -
Bva02g02345 661 PRINTS DNA repair protein radA signature 269 297 - -
Bva02g02345 661 PRINTS DNA repair protein radA signature 180 204 - -
Bva02g02345 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 461 IPR027417 -
Bva02g02345 661 SMART AAA_5 277 436 IPR003593 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02345 K04485 - vvi:100258398 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02345 02 23015268 23022089 Bva02g02345 02 23015268 23022089 ECH