Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02324 ATGGGGTTCTTCCGGTGGGTCAGTTTGAtcattattttccatttctttgcTGCAACACGTGTCATCTCCGATTCCTCCCTGAGTTCAATCCCTACCAAGTTTCTGAATTTTGCAAAGAATCCTGAGGTTTCCAATTGGATGGTCGCAATCAGAAGGAAGATTCACGAAAATCCTGAATTGGGTTATGAGGAATTTGAGACCAGTAAGCTGATAAGAGCAGAATTGGATAAATTAGGCATCTCTTATAAATACCCAGTTGCAATTACTGGTGTTATTGGCTTCATGGGGACTGGACAGGCACCTTTTGTTGCAATAAGAGCTGATATGGATGCTCTTCCAATGCAGGAAATGGTGGAGTGGGAGCACAAAAGTAAAATACCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTACTATGCTTCTCGGTGCTGCAAAGATCCTTAAAGAGCATGAAAAGGAGATACAAGGAACTATTGTTCTTGTGTTCCAACCAGCAGAGGAAGGAGGTGGAGGCgcgaagaaaattttagattctGGAGCCTTGGAAAATGTTAGTGCTATCTTTGGATTACATGTGGCACCTAATATGCCTATAGGTGAAGTGGCTTCTAGGTCTGGTCCTCTATTGGCAGGAAGTGGCTTCTTTGAAGCAGTAATAAGTGGAAAGGGAGGTCATGCAGCTATTCCCCAACATTCTATAGATCCCATATTGGCAGCTTCTAACGTGATTGTCAGCTTACAACATCTTGTTTCTCGCGAGGCTGATCCTCTGGACTCCCAGGTTGTGACGGTAGCAAAATTCCAAGGGGGTggtgcttttaatgttattCCGGATTCTGTCACAATTGGTGGCACCTTCCGAGCTTTTGCAAAGGAAACCTTCCTGCAACTAAGACAGCGGATTGAGCAGGTTATCACAGGGCAAGCTGCTGTGCAGAGGTGCAATGCAACAGTGGACTTTCTTGATGAAGAGAAACCCTTCTTCCCTCCAACTGTAAACGATGGTAATTTGCACAAGCATTTTCGAAAGATTGCGGGGGATTTGCTTGGTGTCGATAAAGTTAATGACATGCAACCATTAATGGGATCCGAGGACTTTGCATTCTATCAAGAGGTTATACCTGGTTACTTCTTCATGCTTGGGATGGAAGATGCATCAGTTGAACGGCTTCAATCGGTGCACTCACcctatttcaaaatcaacGAAGATGCATTTCCATATGGAGCTGCTCTTCATGCATCACTAGCTGCTAGTTATCTTCACGAATTTCAACAGGACGTACCAGTGGTGGAAGTGAATCATCACGATGAATTATG 1322 0.4221 MGFFRWVSLIIIFHFFAATRVISDSSLSSIPTKFLNFAKNPEVSNWMVAIRRKIHENPELGYEEFETSKLIRAELDKLGISYKYPVAITGVIGFMGTGQAPFVAIRADMDALPMQEMVEWEHKSKIPGKMHACGHDAHVTMLLGAAKILKEHEKEIQGTIVLVFQPAEEGGGGAKKILDSGALENVSAIFGLHVAPNMPIGEVASRSGPLLAGSGFFEAVISGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFAKETFLQLRQRIEQVITGQAAVQRCNATVDFLDEEKPFFPPTVNDGNLHKHFRKIAGDLLGVDKVNDMQPLMGSEDFAFYQEVIPGYFFMLGMEDASVERLQSVHSPYFKINEDAFPYGAALHASLAASYLHEFQQDVPVVEVNHHDEL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02324 440 SUPERFAMILY Zn-dependent exopeptidases 42 423 - -
Bva02g02324 440 SUPERFAMILY Bacterial exopeptidase dimerisation domain 212 331 IPR036264 -
Bva02g02324 440 Gene3D Zn peptidases 47 406 - -
Bva02g02324 440 Gene3D - 212 330 - -
Bva02g02324 440 CDD M20_IAA_Hyd 47 410 IPR044757 GO:0009850|GO:0016787
Bva02g02324 440 PIRSF Amidohydrol_AmhX 32 426 IPR017439 GO:0016787
Bva02g02324 440 PANTHER AUXIN CONJUGATE HYDROLASE 1 440 - -
Bva02g02324 440 Pfam Peptidase family M20/M25/M40 104 418 IPR002933 GO:0016787
Bva02g02324 440 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 440 IPR017439 GO:0016787
Bva02g02324 440 TIGRFAM amidohydrolases: amidohydrolase 47 408 IPR017439 GO:0016787
Bva02g02324 440 Pfam Peptidase dimerisation domain 213 310 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02324 Bva-Chr2 22915394 22918577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02324 K21604 K14664 gmx:100794121 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02324 02 22915394 22918577 Bva02g02324 02 22915394 22918577 ECH