Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02309 ATGAACGGTGGTGATGAGGTCGTCGGAGCTCCAGCAGGTCCACCGCAGCCGCTGGAGTGGAAATTTTCTCAGGTTTTTGGCGAGCGTACGGCTGGAGAAGAAGTTCAAGAAGTGGACATAATTTCTGCCATTGAATTTGACAAGTCTGGTGACCATCTTGCAACTGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGAGGACAGATACAAAAGATCATGGGGGGTCAAGAAGGGATTTGGAGAGGATGGACTATTCTACGAGTAGGCATCCTGAGTTCCGCTATAAAACAGAGTTTCAGAGTCATGAACCAGAGTTTGACTATCTGAAGAGCTtggaaatagaagagaaaatcaacaaaataagaTGGTGCCAAATGGCCAATGGTGCCCTGTTTCTTCTATCTACAAATGATAAAACCATCAAATTTTGGAAGGTCCAAGAAAAGAAGGTCAAAAGAATTTCTGAGATGAATGTTGATCCTTCAAAAGCAACGGGAAATGGCTGTATTGCTAGCTCAAGTAATTCGAGTAGTTCTAAGCCATATCTTGCAAATGGAGGATATCCAGACAGATCATACAATTATATGAGCAATGACTACTTGTTTCCAGCAGGAGGCATTCCGTCACTAAGATTACCTGTGGTAGTAACCAGCAATGAGACCAGCCTGGTTGCTCGATGTCGAAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATTTCTAACAACAGTGATGGAGAAACTTTCATATCAGCTGATGATCTGCGGATAAATCTTTGGAACCTGGAAATTAGCAGTCAGAGTTTCAATATTGTTGATGTGAAGCCTGCAAACATGGAGGATCTGACTGAGGTAATAACATCAGCAGAATTCCACCCCACCCATTGTAATATGTTGGCATATAGCAGTTCAAAAGGTTCAATCCGTCTTGTAGATTTGCGGCAATCAGCGTTATGTGATACTCACTCTAAACTATTTGAGGAACAGGAAGTGCCTGGATCCAGATCATTTTTCACCGAGATCATTGCTTCTATCTCAGACATTAAATTTGGGAAGGATGGAAGATATATACTTAGCCGTGATTACATGACTCTAAAGTTGTGGGACATTAATATGGATTCTGGCCCAGTGACAACTTTCCAGGTTCATGAGTACCTAAGACCTAAGCTGTGtgatttatatgaaaatgattcaatttttgacaagtttgagTGTTGTTTGAGTGGTGATGGACTGCGTGTTGCGACTGGTTCATACAGCAATTTGTTCCGTGTGTTCGGTTGTGCTATGGGAAGTACTGAGGCGACAACTTTGGAAGCCAGCAAAAATCCAATGAGGCGTCAAGTTCCAACACCTTCCAGGCCTTCTAGATCCCTGGGAAGTATAACAAGAGTTGTAAGACGAGGAGCGGAAACCCCTGGTGTTGATGCAAATGGGAATTCATTTGACTTCACAACAAAGTTGCTGCACTTAGCTTGGCACCCAAGTGAAAATTCAGTTGCATGTGCTGCTGCAAATAGCTTGTATATGTACTATGCATA 1547 0.4118 MNGGDEVVGAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSRRDLERMDYSTSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQMANGALFLLSTNDKTIKFWKVQEKKVKRISEMNVDPSKATGNGCIASSSNSSSSKPYLANGGYPDRSYNYMSNDYLFPAGGIPSLRLPVVTSNETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDTHSKLFEEQEVPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVTTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAMGSTEATTLEASKNPMRRQVPTPSRPSRSLGSITRVVRRGAETPGVDANGNSFDFTTKLLHLAWHPSENSVACAAANSLYMYYA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02309 514 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 4 514 - -
Bva02g02309 514 SUPERFAMILY WD40 repeat-like 39 506 IPR036322 GO:0005515
Bva02g02309 514 SMART WD40_4 105 145 IPR001680 GO:0005515
Bva02g02309 514 SMART WD40_4 335 370 IPR001680 GO:0005515
Bva02g02309 514 SMART WD40_4 223 262 IPR001680 GO:0005515
Bva02g02309 514 SMART WD40_4 273 313 IPR001680 GO:0005515
Bva02g02309 514 SMART WD40_4 31 66 IPR001680 GO:0005515
Bva02g02309 514 PIRSF PPA2_B55 12 514 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 Pfam WD domain, G-beta repeat 226 262 IPR001680 GO:0005515
Bva02g02309 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 401 427 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 483 512 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 234 261 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 262 289 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 290 318 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 319 346 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 347 374 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 375 400 IPR000009 GO:0000159|GO:0019888
Bva02g02309 514 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 232 246 IPR018067 -
Bva02g02309 514 Gene3D - 68 512 IPR015943 GO:0005515
Bva02g02309 514 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 4 514 IPR000009 GO:0000159|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02309 Bva-Chr2 22830297 22837487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02309 K04354 - gmx:100799449 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02158 08 14217997 14224843 Bva02g02309 02 22830297 22837487 BWGD
Bva08g02158 08 14217997 14224843 Bva02g02309 02 22830297 22837487 ECH
Bva02g02309 02 22830297 22837487 Bva02g02309 02 22830297 22837487 ECH