Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02287 ATGTATCGAGTAGTATCGAAACTAGCTTCATCGATCTGTTCCTCTACATCGAAGAAACTAGTATGTAGTCGGATTATATCATGCAGAAATTATGTAGCTAAAGATATCAATTTCGGAGTTGGGGCTCGTGCTGCTATGCTTCAGGGGGTATCTGAGGTTGCTGAGGCTGTAAAAGTAACAATGGGGCCCAAGGGCCGCAATGTAATTATTGAGAAAAGTCGTGGGAATCCCAAGGTTACAAAGGATGGTGTCACTGTAGCCAAAAGTATCAACTTCAAGGACAAGGCCAAAAATGTTGGTGCAGATCTTGTAAAGCAGGTGGCCAAGGCTACCAACACTACTGCAGGAGATGGTACAACTTGTGCAACCGTTCTGACTCAGGCAATACTCATAGAAGGTTGTAAATCAATTGCCGCTGGTGTGAATGTCATGGATTTGCGTAAAGGTATAAATAAGGCCGTTGATGCTGTAATTACTGATTTGAAAGGCAGAGCAACAATGATAAGCACACCAGAAGAGATAACCCAGGTTGGAACTATATCTGCAAATGGAGAGCGTGATATTGGAGAACTGTTAGCAAGAGCGATGGAGAAAGTTGGGAAGGAGGGAGTTATTACTGTTGCTGATGGAAATACTTTGGATAATGAGTTGGAAGTCGTAGAAGGAATGAAGCTAGCCAGAGGTTACATATCTCCATATTTTATCACAGATCAGAAGACCCAGAAATGTGAATTGGAGAACCCCTTTATCCTCATCCATGACAAGAAAATTTCAGACATGAATTCACTGGTGAAAATATTGGAGCTTGCAGTACAGCGAAAAAGACCACTTCTTGTTGTTGCTGAAGATGTTGAGAGTGATGCACTGGCTCTGCTCATACTCAACAAGCATCATAATGGGCTAAAGgTTTGTGCCGTAAAAGCTCCTGGATTTGGGGAAAATAGAAGAGCAAATCTAGATGATCTTGCCATTCTTACTGGAGGGGAGGTCATCACAGAAGAACGTGGATTGACTCTTGACAAAGTCCAACCTGAATTGCTTGGTTCTGCAAAAAAGGTTACTATCTCCCTTGATGACACGATCATTCTACATGGTGGTGGAGATAAGAAGCTCATTGAAGAGAGATGTGAAGAGCTCAGGACAGCAATTGAGAAGAGCACTGCACTGTTTGACAAGGAGAAAGCACAGGAACGACTATCAAAATTAACTGGTGGTGTAGCTGTTTTCAAGGTTGGAGGGGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGATAGGGTGACAGATGCTTTAAATGCTACTAGAGCAGCTGCGGAGGAGGGAATTGTGCCAGGTGGTGGAGTTGCTCTCCTTTATGCTACCAAAGCTTTGGAGAACCTTCAAACTCAAACGGAGGATGAAAAAAGAGGAGTACAGATTATCCAGAATGCACTGAAGGCTCCTACATTCACAATAGTTTCGAATGCTGGTTTTGATGGTGCTCTGGTTATTGGCAAGTTGTTGGAACAAGACGATCATAATTTGGGTTTTGACGCTGCTACAGGTGATTATGTTGATTTGGTGAAGGCTGGAATAATAGATCCTCTTAAAGTTATTAGAACGGCTTTGGAACGCGCTGCCAGTATCTCGTTGCTATTGTCGACAACTGAAGCAGCCATAGTGGAAGATCCAAATGACAAAAACAAACCTCCTAGCAGGATGCCGGATTTGGACGACTG 1715 0.4321 MYRVVSKLASSICSSTSKKLVCSRIISCRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSRGNPKVTKDGVTVAKSINFKDKAKNVGADLVKQVAKATNTTAGDGTTCATVLTQAILIEGCKSIAAGVNVMDLRKGINKAVDAVITDLKGRATMISTPEEITQVGTISANGERDIGELLARAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFITDQKTQKCELENPFILIHDKKISDMNSLVKILELAVQRKRPLLVVAEDVESDALALLILNKHHNGLKVCAVKAPGFGENRRANLDDLAILTGGEVITEERGLTLDKVQPELLGSAKKVTISLDDTIILHGGGDKKLIEERCEELRTAIEKSTALFDKEKAQERLSKLTGGVAVFKVGGASEAEVGERKDRVTDALNATRAAAEEGIVPGGGVALLYATKALENLQTQTEDEKRGVQIIQNALKAPTFTIVSNAGFDGALVIGKLLEQDDHNLGFDAATGDYVDLVKAGIIDPLKVIRTALERAASISLLLSTTEAAIVEDPNDKNKPPSRMPDLDD 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02287 571 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 Hamap Chaperonin GroEL [groEL]. 32 569 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Bva02g02287 571 Gene3D - 36 553 IPR027413 -
Bva02g02287 571 SUPERFAMILY GroEL apical domain-like 214 406 IPR027409 -
Bva02g02287 571 Pfam TCP-1/cpn60 chaperonin family 53 554 IPR002423 GO:0005524
Bva02g02287 571 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 17 565 - -
Bva02g02287 571 Coils Coil 369 389 - -
Bva02g02287 571 Gene3D GroEL 222 403 IPR027409 -
Bva02g02287 571 TIGRFAM GroEL: chaperonin GroL 33 557 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 Gene3D - 167 440 IPR027410 -
Bva02g02287 571 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL 17 565 - -
Bva02g02287 571 SUPERFAMILY GroEL equatorial domain-like 37 552 IPR027413 -
Bva02g02287 571 CDD GroEL 34 554 IPR001844 GO:0042026|GO:0140662
Bva02g02287 571 SUPERFAMILY GroEL-intermediate domain like 168 234 IPR027410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02287 Bva-Chr2 22683873 22689338 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02287 K04077 - gmx:100778935 959.133