Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02280 ATGATTGACTGTACCAGTCAGACCAGTTCAATTGAGTGCCACGAGGGGGGCATGCCTAAAGATGATCAAGGGTCTGGTCCCGTTTTGAAGAAGTTTAAGAAAACAGTTCTGGCTTCTCAAAACGTTGAGATGTGTGAAGCAGCAGAAAGCCAGGAGGCCCAGGACCGACTTAGTGATTTACCGGATTGCCTTCTCCATCACATTTTGTCTTTCATGGAAACAAAGGTCGCAATTAGAACTTGTGTTTTATCAAATAGGTGGAGATATCTGTGGACTTCAATTCCCTGTCTAAACTTCAGCAGCAAATCATTTACTCGGTTGACAGATTTCAAGAAATTTGTGTTGTGGGTCTTATCTCATCGTGATTCTGCTCACGTCAAAGTTCTTTTTTACAGTCGCTTTGGGGTGGATTATGCAACAGATCAATCTCTGTTGACTAAGGTTATTGAATATGCAGTATCACATGGTGCCGAAGATATCAGAATCAATCTTCGTGCAAAAAGCTCTGGCAGTCCACCCATTGAAATccctttctctatttttacttGTCAATCCTTGAAAGTGCTTGAGTTAAAAGATTGCTGTGTTACAAATGGATCAACacctttttgtttcaaatcaTTGGAGATGCTGCATCTGGACCACTTCAAGTTGCATCCTGTTGCATCTGATTCTTCGAATCCATTTGCTAATTATGCAGagttttttggttttactaCATTAACTACTCTACATCTCAACAGCTTCACTCTAGCTTGTACAGGAACTGACCGTGTGGATCCATTTGCAAACTGTGtcaatttgaagaatttgcACTTAAGTGACATTTGCTTTAAGTCAGATTTGAACCCTGAGGATTTTGTGATATCTGCTCCGCAACTCAATAAGTTGACTCTCATTTGTAACCGGTTTAAATGTAAACTTTTGGTTTCTGCACCACAGCTTACCAACTTTAGCTACTTGTATTCAACTCCCCGTGCCTTCTTTGAGTTTAATCTTCCTTCGTTACATGACTTGGTAATTGATATTCATGAACTACATAGTCAAATCGAAAAATCTCATCAGGGGCAGAAGGAGGAGACTTTACATGGTTTGATTAATATGTTACGAGGACATCATAGTGCTGAAGCAGTCAAATTGTCCTTCTGTACCGTTAAGgcTAATTGTGGGACTGCTGATTTGCTAAAGTATAAACTTTCATCTTTTAGTGAATTGAAGTCTTTGAATTTAAGAGCGGGATCAACATATAAAATCTTCATTGACAACCTTGACCATATAACTGCCTATTACCGTGATAGCTCACAGCATGCAGACTTCGAAATTGTCAGTGTATA 1334 0.3771 MIDCTSQTSSIECHEGGMPKDDQGSGPVLKKFKKTVLASQNVEMCEAAESQEAQDRLSDLPDCLLHHILSFMETKVAIRTCVLSNRWRYLWTSIPCLNFSSKSFTRLTDFKKFVLWVLSHRDSAHVKVLFYSRFGVDYATDQSLLTKVIEYAVSHGAEDIRINLRAKSSGSPPIEIPFSIFTCQSLKVLELKDCCVTNGSTPFCFKSLEMLHLDHFKLHPVASDSSNPFANYAEFFGFTTLTTLHLNSFTLACTGTDRVDPFANCVNLKNLHLSDICFKSDLNPEDFVISAPQLNKLTLICNRFKCKLLVSAPQLTNFSYLYSTPRAFFEFNLPSLHDLVIDIHELHSQIEKSHQGQKEETLHGLINMLRGHHSAEAVKLSFCTVKANCGTADLLKYKLSSFSELKSLNLRAGSTYKIFIDNLDHITAYYRDSSQHADFEIVSV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02280 444 Gene3D Ribonuclease Inhibitor 166 428 IPR032675 -
Bva02g02280 444 Pfam F-box domain 57 95 IPR001810 GO:0005515
Bva02g02280 444 MobiDBLite consensus disorder prediction 1 26 - -
Bva02g02280 444 Gene3D - 38 97 - -
Bva02g02280 444 PANTHER CYCLIN-LIKE F-BOX 42 444 - -
Bva02g02280 444 PANTHER F-BOX PROTEIN-LIKE 42 444 - -
Bva02g02280 444 SUPERFAMILY F-box domain 54 110 IPR036047 GO:0005515
Bva02g02280 444 SUPERFAMILY RNI-like 171 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02280 Bva-Chr2 22645960 22649441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02280 53 219 EF-hand Containing Proteins AT5G41840 30.851 7.92e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02280 - - vun:114167379 633.639