Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02261 ATGTTTCAGAACCACTTCCCTGACATTCTGGGCCTCAACAAGGGCACACAGATCAAAGGGACAGTGGTGTTGATGAGAAGGAACGTGTTGGACTTCAACGACTTTGGAGCCACGGCAATTGATAATCTTACTGAGTTTTTAGGTCAAGGGGTCTCTCTGCAGTTAGTCAGTGCCAACAACGTTGATTCTGGAAATTTGAAAGGGAAAGTTGGAAAGGCTGCATATCTCGAGAGTTGGCTTACGAGTACCACATTTGCACCCTTAACAGCCGGAGAGACTGCTTTCCAAGTTCACTTTGATTGGGATGATGAGATTGGTGTTCCAGGAGCATTCATCATAAAAAACAATCATCTCGCCGAGTTCTTCCTTTTGAATCTCACCCTTCATGATGTTCCAAACCAAGGTGACATCCACTTTGTCTGCAACTCCTGGATTTACCCAGCATCCCGATACGAGAGCGACCGCATTTTCTTCGCCAACAAGCCGTATCTTCCAAGTGAAACACCACAAGCACTAAGGGATTGCAGAGAAAAAGAACTAGAGGTTCTGAGAGGAGATGGAACAGGGGAGCGCCAGGAATGGGACAGGATCTATGACTATGATGTCTACAATGATTTGGGCAACCCTGATTGGGGTTCATCTTTAGCTCGCCCAATTCTTGGAGGCTCTACTGAATTGCCTTACCCTCGCAGGGGAAGAACTGGCAGACCACCAACAAAGTCAGACCCAAAGAGCGAGAGCAGGCTGTTCCCTCTTGTACAAGACTTTGACATTTACGTTCCAagagatgagagatttggtcactTGAAGATGGCAGATTTTCTAACTTACATTCTGAAATCGGTGTCTCAAAATCTCAGACCACTATTGGAATCTGTGTTCAGTTTCACACCAAATGAATTTGACAGCTTTGAAGATGTACGCGATCTCTATGAAAATGGATTCCCACTGCCTCAAGATCTTTTCAAGACTATCAGTGATCAAATTCCTGCACCAATGCTCAAGGAAATTTTTAGAACTGATGGTGAACAGGCCCTCAGGTTTCCAACCCCTAAAGTGATTGAAGATAATAAGTCTGGCTGGATGACTGATGAAGAATTTGCAAGAGAGATGCTTGTTGGTGTAAATCCCGGCGTGATTCGCCTCCTTGAAGTGTTCCCACCACAAAGCGCGTTAGATAGCACTGTTTATGGCGATCAAACTAGTAAAATAACCAAAGATCAGTTAGAGAAGAACATGGGAGGGCTCACAGTAGAAGAGGCACTGGCTAACAAGAAATTGTTCATATTAGACTACCATGACGCATTCATGCAATATCTGAGGCTGATAAATACTCCTGAAGAAAGAGCTTATGCCAGTAGGACAATCCTTTTCTTGCAAGAGGATGGAACCTTGAAACCATTAGCCATTGAATTAAGTTTACCACACCCAAATGGAGATAAGTTTGGCGCAGTTGGTGATGTCTATCTTCCTGCAGAACAAGGTGTTGAGGGTACCATTTGGCTTCTGGCTAAAGCTTACGTAGCCGTCAGTGACTCCGGCTATCATCAACTTATCAGCCACTGGTTGAATACTCATGCAGTGGTTGAGCCATTCATAATAGCAACAAACAGGCAACTGAGTGTGCTTCACCCTATTTACAAACTTCTGTTTCCTCACTATCGTGACACCATGAATATCAATGCACTTGCCCGGCAGGCCCTAATCAACGCCGATGGCATCATAGAGTTTTCATTCTTGCCGGGGAAATATGCAATGGAGATGTCAGCAGTGATTTACAAGAATTGGGTTTTCCCTGACCAAGCACTTCCTTCTGATCTTATCAAGAGGGGAATGGCTGTTGAGGACCAAGATTCTCCGAATGGCCTTCGCCTTGTGGTCGAAGATTACCCTTATGCTGTTGATGGGCTTGAGATATGGGATGCAATCAAGACATGGGTGCAGGACTATTGCTCATACTACTACAAGACAGATGAGATTGTTGCACAAGACTCTGAACTACAAGCTTGGTGGAAGGAAATTGTAGAGGTGGGTCATGGTGACAAGAAAAATGAGCCATGGTGGTTTAAGATGAACACTGTTGCAGATTTGGTTCAAACTTGCACAATCATCATATGGACCTCTTCAGCTCTCCATGCTGCAGTCAATTTTGGGCAATATCCTTATGGAGGTTACATTTTGAACCGGCCAACTCTTAGCAGAAGATTGATTCCTAAAGAGGGAACTCCAGAGTATGATGAAATGGTGAAGAGCCCTCAAAAGGCTTTGCTCAAGACAATCACGCCAAAGTTCCAGACCCTCATTGATCTTTCAACCATAGAAATTTTGTCAAGGCACACTTCTGATGAGTACTATCTTGGGCAGAGGGAGCATCCTAATTGGACAGCCGATGCTACGCCATTAGCAGCATTTCAGAAGTTTGGAAAGAAGCTGGCCGAAATTGAGGAAAAACTCATAAGCAAGAACAATGACGAGACACTCAGAAACAGAGTTGGGATTGTTAATATGCCATACACTCTGCTCTATCCTTCCAGTGAAGTTGGATTGACAGGAAGAGGAATCCCCAACAGCATCTCTATCTA 2582 0.4404 MFQNHFPDILGLNKGTQIKGTVVLMRRNVLDFNDFGATAIDNLTEFLGQGVSLQLVSANNVDSGNLKGKVGKAAYLESWLTSTTFAPLTAGETAFQVHFDWDDEIGVPGAFIIKNNHLAEFFLLNLTLHDVPNQGDIHFVCNSWIYPASRYESDRIFFANKPYLPSETPQALRDCREKELEVLRGDGTGERQEWDRIYDYDVYNDLGNPDWGSSLARPILGGSTELPYPRRGRTGRPPTKSDPKSESRLFPLVQDFDIYVPRDERFGHLKMADFLTYILKSVSQNLRPLLESVFSFTPNEFDSFEDVRDLYENGFPLPQDLFKTISDQIPAPMLKEIFRTDGEQALRFPTPKVIEDNKSGWMTDEEFAREMLVGVNPGVIRLLEVFPPQSALDSTVYGDQTSKITKDQLEKNMGGLTVEEALANKKLFILDYHDAFMQYLRLINTPEERAYASRTILFLQEDGTLKPLAIELSLPHPNGDKFGAVGDVYLPAEQGVEGTIWLLAKAYVAVSDSGYHQLISHWLNTHAVVEPFIIATNRQLSVLHPIYKLLFPHYRDTMNINALARQALINADGIIEFSFLPGKYAMEMSAVIYKNWVFPDQALPSDLIKRGMAVEDQDSPNGLRLVVEDYPYAVDGLEIWDAIKTWVQDYCSYYYKTDEIVAQDSELQAWWKEIVEVGHGDKKNEPWWFKMNTVADLVQTCTIIIWTSSALHAAVNFGQYPYGGYILNRPTLSRRLIPKEGTPEYDEMVKSPQKALLKTITPKFQTLIDLSTIEILSRHTSDEYYLGQREHPNWTADATPLAAFQKFGKKLAEIEEKLISKNNDETLRNRVGIVNMPYTLLYPSSEVGLTGRGIPNSISI 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02261 860 MobiDBLite consensus disorder prediction 222 246 - -
Bva02g02261 860 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
Bva02g02261 860 Gene3D - 270 359 IPR027433 -
Bva02g02261 860 PRINTS Lipoxygenase signature 516 533 IPR013819 GO:0016702|GO:0046872
Bva02g02261 860 PRINTS Lipoxygenase signature 536 556 IPR013819 GO:0016702|GO:0046872
Bva02g02261 860 PRINTS Lipoxygenase signature 498 515 IPR013819 GO:0016702|GO:0046872
Bva02g02261 860 Gene3D - 494 859 - -
Bva02g02261 860 SMART LH2_4 16 160 IPR001024 GO:0005515
Bva02g02261 860 Pfam Lipoxygenase 172 843 IPR013819 GO:0016702|GO:0046872
Bva02g02261 860 Gene3D - 164 269 - -
Bva02g02261 860 PANTHER LIPOXYGENASE 14 860 IPR000907 GO:0016702|GO:0046872
Bva02g02261 860 PRINTS Plant lipoxygenase signature 155 176 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 385 404 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 194 210 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 451 475 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 773 787 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 346 362 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 298 319 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 129 147 IPR001246 GO:0016491
Bva02g02261 860 PRINTS Plant lipoxygenase signature 227 246 IPR001246 GO:0016491
Bva02g02261 860 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 14 860 - -
Bva02g02261 860 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 162 860 IPR013819 GO:0016702|GO:0046872
Bva02g02261 860 SUPERFAMILY Lipoxigenase 164 860 IPR036226 -
Bva02g02261 860 Pfam PLAT/LH2 domain 65 158 IPR001024 GO:0005515
Bva02g02261 860 Gene3D - 360 493 - -
Bva02g02261 860 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 16 163 IPR036392 GO:0005515
Bva02g02261 860 ProSiteProfiles PLAT domain profile. 18 159 IPR001024 GO:0005515
Bva02g02261 860 Gene3D PLAT/LH2 domain 10 163 - -
Bva02g02261 860 ProSitePatterns Lipoxygenases iron-binding region signature 1. 516 530 IPR020833 GO:0016702|GO:0046872
Bva02g02261 860 CDD PLAT_LH2 16 160 IPR042057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02261 Bva-Chr2 22500566 22504224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02261 17 860 Acyl Lipid Metabolism Gene Families AT1G55020 63.164 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02261 K15718 - mnt:21384383 1218.37