Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02233 ATGGCGGATAATGCATCATCTTCACCTCCAAAGCCCCTTCAATCTCCCCCAAACCCGATAGACCCAACAGGAATTTCTCagaatcccacaaacccatcaaATTCTTCATCAAACCCACCAATTCCATCGCCCTCTAATCTTTCCCAGTCTCCTTCAATTGATCATCTTCCGCAGATGTCTTCCCCTCCTCTTCCTCCCCTTCCCCCAATTTCTGTCCCTCAATCccaacaacaacagcagcagctGCAACAACAACAGCTGCAACAGCAGCTCAACCCCGCTTCTGGGTTGCCCTTACAACAGCAGCAACAactgcagcagcagcagcaacaatcTCAACCTTTGGTCCAGCAGTCTCAAAATGTCAATCCCATGTCAAATTATCAACTCCAACAAAGCCTTCAGCGATCACCTTCAATTTCCCGGTTGAATCAAAttcagcagcagcaacaacagTTTGGTGTCATGAGACAGCAAACGGGTTTATATGGGCAGATGAATTTTGGTGGTTCTGCTTCTACTCAGCTGCAGAATCAGCAGCAATTAGGGAGCTCAGATTTGTCATGGTCTGCATTGCTAGGGCAGAGTGGACAGCTCCCTATGTTGTCGGGTGCTGCTGCACCGTTCAATTTATTGGCCTCGCCAAGGCAGAAGGCAGGTGGGCTAGTCCAAGGGTCTCAATTTCATCCTGGTAATTCTTCTGGACAACCTCTGCAAGGAATGCAGGCAATGGGAATGATGGGGTCACTTAATCTCAGCTCGCAACTAAGAGCCAGTGGAGCCATTGCTTATGCTCAGCAGCAGCGAATGAATCAGGGCCAAATTAGACAGCAACTATCCCATCAGAATGCGCTCAACACTTCACAGGTTCAAGGCTTGCCAAGGACTTCATCCCTTGCATTTATGAATTCTCAATCATCTGGGTTGTCTCAGAATGGACAGCCGGGGATGCTTCATGCTTCTTTAGCACAACAACAGCGGCTTAAGCAAATATCTGGCCCCAGCGCACCCTCTTTGCGTCTTCAACAACATCAGagacagcagcagcagcaagcCCTCTTGCAGCAGCAGCTGGCTTCATCCACTCAACTGCAACAAAACTCTATGACCCTGAACCCACAGCAATTTTCCCAGCTTGTGCAGCAACAGCAGCCAATGGGGCAGCCTCAGATGCATcagcagcaacagcaacaacaaacccagcagcagcagcaacctCAGCAACAACTAATGCAACAGCAACCTCAACAACAATCTCAACTACAAGCACCTGTTCATcagcagcaacagcagcagTCTCCAAGAATGCCGGGCCCTACTGGCCAAAAGTCACTTAGTTTGACAGGATCGCAGCCTGATGCTACTGCATCTGGGACAACTACACCAGGTGGAAGTTCAAGTCAAGGAACAGAAGCAACAAACCAACTCCTTGGGAAGAGAAAGATACAGGATTTGGTTGCCCAGGTAGATCCACAGGGCAAGCTGGATCCTGAAGTCATAGATCTTCTTCTAGAGCTTGCTGATGACTTCATTGATTCTACAACTACACATAGTTGCATTTTGGCAAAGCATAGAAAGTCATCAACTTTGGAGTCCAAAGATTTACTGCTACACCTGGAGAAAAATTGGGATTTAACAATTCCAGGGTATTCAAGTGAAGAGAAGAAGTATCAGAGCAAACCGCTATTAAATGATCTCCACAAGAGGCGCCTGGATACGATACGCACATTGATGGAAAGCTCACAGTCTGAACCCAATGTAAACAATCTTAAAGAGATGACCAGACAGGGCCTTGCTAACCCTCTGGGTGCTCATCACCTGATAAGACCTTCACTGAGTTCAGAGCAGTTGGTTTCTCAATCAACTGGTTCTCAAATGCTACAACAGATGACAAGGTTTTA 1901 0.4298 MADNASSSPPKPLQSPPNPIDPTGISQNPTNPSNSSSNPPIPSPSNLSQSPSIDHLPQMSSPPLPPLPPISVPQSQQQQQQLQQQQLQQQLNPASGLPLQQQQQLQQQQQQSQPLVQQSQNVNPMSNYQLQQSLQRSPSISRLNQIQQQQQQFGVMRQQTGLYGQMNFGGSASTQLQNQQQLGSSDLSWSALLGQSGQLPMLSGAAAPFNLLASPRQKAGGLVQGSQFHPGNSSGQPLQGMQAMGMMGSLNLSSQLRASGAIAYAQQQRMNQGQIRQQLSHQNALNTSQVQGLPRTSSLAFMNSQSSGLSQNGQPGMLHASLAQQQRLKQISGPSAPSLRLQQHQRQQQQQALLQQQLASSTQLQQNSMTLNPQQFSQLVQQQQPMGQPQMHQQQQQQQTQQQQQPQQQLMQQQPQQQSQLQAPVHQQQQQQSPRMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVAQVDPQGKLDPEVIDLLLELADDFIDSTTTHSCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSKPLLNDLHKRRLDTIRTLMESSQSEPNVNNLKEMTRQGLANPLGAHHLIRPSLSSEQLVSQSTGSQMLQQMTRF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02233 633 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 26 409 IPR037794 GO:0000124|GO:0005669|GO:0046695
Bva02g02233 633 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 26 409 - -
Bva02g02233 633 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 398 632 - -
Bva02g02233 633 MobiDBLite consensus disorder prediction 1 106 - -
Bva02g02233 633 MobiDBLite consensus disorder prediction 24 57 - -
Bva02g02233 633 CDD TAF12 477 545 IPR003228 GO:0005669|GO:0006352
Bva02g02233 633 Pfam Transcription initiation factor TFIID subunit A 478 545 IPR003228 GO:0005669|GO:0006352
Bva02g02233 633 SUPERFAMILY Histone-fold 475 546 IPR009072 GO:0046982
Bva02g02233 633 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 398 632 IPR037794 GO:0000124|GO:0005669|GO:0046695
Bva02g02233 633 Gene3D Histone, subunit A 472 547 IPR009072 GO:0046982
Bva02g02233 633 MobiDBLite consensus disorder prediction 73 106 - -
Bva02g02233 633 MobiDBLite consensus disorder prediction 613 633 - -
Bva02g02233 633 MobiDBLite consensus disorder prediction 58 72 - -
Bva02g02233 633 MobiDBLite consensus disorder prediction 379 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02233 Bva-Chr2 22367901 22373026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02233 K03126 - gmx:100783017 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02233 02 22367901 22373026 Bva02g02233 02 22367901 22373026 ECH