Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02224 ATGCACACTCATCCTGGCGCCAATGAACTTCTATTGGTGCTGCATGGCCATATCACTGCTGGATTTATATCATCAGATAACTCAGTTTATGTGAAGACAGTGAAAAAGGGAGAAATCATGGTTTTCCCGCAAGGGTTACtacattttcaaataaatgcTGGCAAAAATGGAGCCCTTGCTTTTGTTACTCTCAGCAGTCCCAACCCTGGCCTGCAAATCCTTGATTTTGCACTGTTCGCTTACAACTTGACGACTGCAACAGTGACAAAGACTACTTTCCTTGATGAAGCTACAGTGAAGAAGCTTAAGGCTGTTCTTGGAGGCATTGGCTA 332 0.4217 MHTHPGANELLLVLHGHITAGFISSDNSVYVKTVKKGEIMVFPQGLLHFQINAGKNGALAFVTLSSPNPGLQILDFALFAYNLTTATVTKTTFLDEATVKKLKAVLGGIG 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02224 110 PRINTS Germin signature 32 52 IPR001929 GO:0030145
Bva02g02224 110 PRINTS Germin signature 65 80 IPR001929 GO:0030145
Bva02g02224 110 PRINTS Germin signature 2 22 IPR001929 GO:0030145
Bva02g02224 110 SUPERFAMILY RmlC-like cupins 1 105 IPR011051 -
Bva02g02224 110 Pfam Cupin 1 99 IPR006045 -
Bva02g02224 110 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 1 106 - -
Bva02g02224 110 Gene3D Jelly Rolls 1 109 IPR014710 -
Bva02g02224 110 SMART Cupin_1_3 1 100 IPR006045 -
Bva02g02224 110 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02224 Bva-Chr2 22340603 22340935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02224 1 110 Miscellaneous Gene Families AT1G72610 71.818 7.87e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02224 - - gra:105799044 161.77