Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02218 ATGGTGGTCTCTACCATAGCTTTATACGCTAGCCCACCAAGCAGTGTCTGCTCCACGCCGCACCCTTGCCAGATCAATGCTCATGGGTCTTATGACTTCGATTTGGGTTCTCGTTCTTCGTCTTCGTCGTCTTCCACTACGGCATCAACATCTCAGAGGCCAGTAATGGGTGGCCTCTCGTGCCTGTTCTCTTCGCCGGCAGTGAAGCACGCACCGTTGTCGAGCTTCTCCAGTGCCGGAGAGGAATTGTGTTCTCTGAGGCATGATAGAGGGGAAGAATTAAAGGAACTGAGTTGCTCCTTTTCCTATTCGCCAAGTAAATTTGGCGGATCGTCTTGGAAGAGGGATCAGAGCCCAGTATCGGTTTTCCAAGCTCCTGTTTCGTGTAGCAGCAGTGCTGGTGGTTCCGCAAGGAGTCAATCAGTGAGGTTCGGATGCGAAAAGAGTGGGGATGTGAATTATCAGAGTTCAGTTCGGGGTGGGACTAGTGGCCTGTTTGCTGGGTTTGTGAGGAATGCATTAGGGTCTTGCTTAGATTATGATTCCCCAAGTTCTAAGGTGCGTAATGGTGACTTAGATGTGGGTTCTTCATCTGCCTTGGTTGATGAATTGACCTTCAATTTGGAGGATGCTTTTGTGGAGGGTAGTTTTGAGCCTTATGCTAGAGAATTGCTGCTGAAGGCCCAGTTGAGGCACAAGATCTTTTGTGAAGAGTTCGTTATTAAAGCTTTTTATGAAGCTGAGAAGGCGCATAGAGGGCAGATGCGAGCTTCTGGTGATCCGTATTTGCAGCATTGTGTGGAAACAGCAGTGCTGCTCGCTTTGATTGGTGCGAATTCTACAGTAGTTGCTGCTGGGCTCTTGCATGACacacttgatgattcttttctgacatatgattatatatttggGGCATTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTGTCTAAGCTGAGTCACTTAAGCAAACTCGCACGTGATAACAATACAGCTTGCAAGTCAGCTGAAGCAGACCGCCTGCATACCATGTTTCTTGCGATGGCAGATGCAAGAGCTGTACTCATTAAATTGGCAGATCGATTACATAATATGATGACACTCGATGCACTGCCAGTAGCCAAGCAACAAAGGTTCGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAATCGTTTGGGAATATCTACTTGGAAGGAGCAGTTggaaaatttatgttttaagcaTCTCAACCCGGAGGAGCACAAAGAACTGTCTTCAAAGCTTGTGGAGTCGTCTGACGATGCAATGATTAATTCTGCCCAAGAGAGATTAGAGCGAGCACTTAACGATGAAGGCATTTCTTATGTCCTATCTGGGCGTCACAAGAGCTTGTACAGCATTCATTGCAAAATGTTGAAGAAGAAGATAACCATGAATAACATCCATGATATTTATGGGCTGCGCTTGATTGTTGACAAGGAAGAGGACTGCTATAAAGCCTTGAGAGTTGTTCAACAGCTATGGTCTGAGGTACCTGGAAAGCTGAAAGATTACATTAGCTGCCCCAAGTTCAATGGgTACAAATCTTTGCATGCTGTTGTGATAAGTGAAAGCAACATACCCCTTGAAGTACAAATTCGGACAAAGGAGATGCATTTGCAAGCAGAATTTGGGTTTGCTGCTCATTGGAGATACAAGGAAGGAGATTGTCAGCATTCCTCATTTGTGCTTCAGATGGTGGAGTGGGCCCGATGGGTCGTGACCTGGCAGTGTGAGACAATGAGTAAAGATCGTTCATCTGTAGACTTCCCCGATTCAATCAAGCCGCCATGCAAGTTCCCTTCCCATGCTGATGATTGTCCATATTCTTATAGATCTCACTGTGGTGATGACTTTGACAGCCCCGTATTTGTAATCATGATCGAGAATGATAAGATGTCCGTCCAAGAGTTTCCCGCAAATGCGACAGTAATGGATTTGTTGGAAAGAGCTGGTAGAGGAAGCTCCAGATGGACTCCGTACAGGTTCCCACTGAAGGAAGAATTGAGGCCAAGGCAGAATCATGAGCCTGTAAGTGATCCCACCAGCAAGTTGAAGATGGGTGATGTGGTGGAGCTAACACCAGCAATACCTGACAAGTCTCTAACTGAGTATAGGGAAGAAATCCAGCGAATGTATGATCGTGGGCCAACTGTATCAGGCAAAAGAGTGCCTGCTGGCATGGTTGGCTTCAGAAGTTG 2228 0.456 MVVSTIALYASPPSSVCSTPHPCQINAHGSYDFDLGSRSSSSSSSTTASTSQRPVMGGLSCLFSSPAVKHAPLSSFSSAGEELCSLRHDRGEELKELSCSFSYSPSKFGGSSWKRDQSPVSVFQAPVSCSSSAGGSARSQSVRFGCEKSGDVNYQSSVRGGTSGLFAGFVRNALGSCLDYDSPSSKVRNGDLDVGSSSALVDELTFNLEDAFVEGSFEPYARELLLKAQLRHKIFCEEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAVLLALIGANSTVVAAGLLHDTLDDSFLTYDYIFGAFGAGVADLVEGVSKLSHLSKLARDNNTACKSAEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPEEHKELSSKLVESSDDAMINSAQERLERALNDEGISYVLSGRHKSLYSIHCKMLKKKITMNNIHDIYGLRLIVDKEEDCYKALRVVQQLWSEVPGKLKDYISCPKFNGYKSLHAVVISESNIPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVVTWQCETMSKDRSSVDFPDSIKPPCKFPSHADDCPYSYRSHCGDDFDSPVFVIMIENDKMSVQEFPANATVMDLLERAGRGSSRWTPYRFPLKEELRPRQNHEPVSDPTSKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGPTVSGKRVPAGMVGFRS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02218 742 Gene3D Hypothetical protein af1432 222 413 - -
Bva02g02218 742 Gene3D Beta Polymerase, domain 2 414 545 IPR043519 -
Bva02g02218 742 Pfam Region found in RelA / SpoT proteins 455 564 IPR007685 GO:0015969
Bva02g02218 742 SMART RelA_SpoT_2 455 565 IPR007685 GO:0015969
Bva02g02218 742 CDD HDc 260 388 IPR003607 -
Bva02g02218 742 PANTHER - 1 742 - -
Bva02g02218 742 CDD NT_Rel-Spo_like 434 553 IPR007685 GO:0015969
Bva02g02218 742 SUPERFAMILY HD-domain/PDEase-like 222 413 - -
Bva02g02218 742 ProSiteProfiles S4 RNA-binding domain profile. 683 717 - -
Bva02g02218 742 ProSiteProfiles HD domain profile. 262 366 IPR006674 -
Bva02g02218 742 Pfam HD domain 245 397 - -
Bva02g02218 742 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 742 - -
Bva02g02218 742 SUPERFAMILY Nucleotidyltransferase 403 594 IPR043519 -
Bva02g02218 742 SMART hd_13 258 375 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02218 Bva-Chr2 22323648 22327688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02218 263 564 EF-hand Containing Proteins AT3G17470 31.595 3.14e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02218 K00951 - zju:107435941 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02218 02 22323648 22327688 Bva02g02218 02 22323648 22327688 ECH