Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02214 ATGGCTCTTGCAAAAGAAATCATGGGTTCTTCATTGATGGAGAGGTCctcatttgtttcttcttcaaaagtgcttctaaatcataaatttcaacAGAAGCAGAATCTGCTTTTGGTGAGGCCTGTTTTGGTATCTTTGGAGAATAGAAAAGTGCTGAGGTCGAGGAAGGGTGTGAATGGTACTGTGACAGCTATTGGTGAGGATTTGGTCAaggcttcttcttctcctgTGTCTGCAGAGAAACCAGTTAAATTCAGAGTTAGAGCTGTGGTGACAGTGAGAAACAAGATCAAGGAGGATTTAAAAGACACCCTTGTGAAGCATTTGGATGCACTGACTGACAGAATTGGCAGAAATGTTGTTCTGGAGCTTATCAGCACTGAGAAAGACTCAAAATTGATGGCACCAAAGAAGAGCAATGAAGCAGTGCTGAGGGACTGGTCAAAGAAATCCAATGTTAAAGCAGAGAGGGTTAACTACACAGCAGAATTCATTGTGGACACAGATTTTGGGGTGCCAGGAGCTATTACTGTGACCAACAAACACCAGAAAGAGTTTTTCTTGGAGAGCATAACCATTGAAGGATTTGCTTGTGGTCCAGTTCATTTCCCCTGCAACTCATGGGTGCAAGCCAGTAAAGATCATCCTGGGAAGAGAATATTCTTTTCTAACAAGCCATATCTACCAAATGATACACCGCCTGCGCTTGTAGCATTAAGAGACAGGGAGCTGAGAAATCTTCGAGGAGATGGCAAAGGAGTTAGAAAATTATCTGACAgaatatatgattatgatttcTATAATGATTTGGGTAACCCGGATAAAGGAATTCAGCTCACAAGACCAACCCTTGGAGATTCAGACAAGTATCCGTACCCAAGACGGTGTCGTACTGGGCGTGCCCCAATGGATACAGATTTGTCTGCAGAGAGTCGCGTGGAAAAGCCATTGCCTATGTACGTTCCGAGAGATGAACAATTTGAAGAGTCTAAGCAGACGACGTTCTCTGCTATGAGACTGAAAGCACTGTTTCATACGTTGATCCCTGGGTTAAAGGCCAGCGTTTCTGCTGAAAACAATGACTTCAATGAATTCTCAGACGTCGATGGCCTCTACAGTGAAGGCCTTCCCATTAAATTGCAGGATGAACTTCTAAAGAAGCTTCCATTGCCTAAAGTGGTGACCAAGTTCCAAGAATCTAGTCGAGCATTCCTGAAATATGACACGCCCAAGGTCATTTCCAAGGACAAGTTTGCTTGGTTGAGAGATGACGAATTCGCCCGCCAAGCCATTGCTGGAGTTAATCCTGTTAACATTGAGAAGCTGAAAGTTTTTCCACCCGAGAGCAAGCTTGATGCTCAAGTTCACGGTCCTCTAGAATCTGCCCTTAAAGAAGAGCACATTCTAGGCCAACTTAATGGCATGACTGTCCAACAGGCAATAGAGGAAAACAAGTTGTTTATCATAGATTACCATGACGTCTACCTTCCATTTCTGGATAGAATAAATGCTCTAGATGGTAGAAAAGCTTATGCAACAAGGACAGTTTTCTTCTTGACTCCACTTGGGACTCTCAAGCCTATTGCCATAGAGCTTAGTCTCCCGCCTTCAGGACCCAGTTCACTGTCAAAACGCGTAGTTACACCTCCAGTTGATGCCACCACCAATTGGGAGTGGCAGCTTGCTAAGGCCCATGTTTGTGCCAACGATGCTGGTGTTCACCAACTTGTTAACCATTGgtTACGCACACATGCCTGCATGGAACCATTCATATTGGCTGCTTATAGGCAGTTAAGTGCAATTCACCCCATATTTAAGCTATTGGATCCTCACATGAGGTACACATTGGAAATCAATGCCCTGGCACGCCAAGGCCTAATCAATGCAGATGGGATCATTGAATCATGCTTCACCCCTGGGCGCTATGTCATGGAGATTAGTTCTGCAGCTTACAAAAACTTCTGGCGCTTTGACAAAGAGAGCCTCCCTGCAGATCTCATCCGCAGGGGAATGGCTGAACCTGATCCAACACAACCATACGGTCTAAAGCTCCTTATTCAAGATTACCCTTACGCAAGTGATGGTCTTATGATTTGGTCGGCAATTGAGGACTGGGTGCGTGCCTATGTGAACCATTACTACCCAAACTCAGCCCTCATATGCAATGACAAAGAGCTACAAGCTTGGTATGATGAGTCAGTCAAAGTAGGCCATGCTGATCTTCAAAATGAACCCTGGTGGCCAACATTGAACAACAGCGATGACCTCGTCTCTATTCTCACCACTTTGATTTGGATTGCTTCAGCTCAACATGCTGCCCTTAATTTTGGGCAGTACCCTTACGGTGGATACGTGCCAAATCGTCCACCGTTAATGAGAAGATTGATCCCAGACGAAGGCGATCCAGAATATGAAGCTTTCCAAGCAGACCCACAAAAATATTTCCTCAACGCTTTGCCTAGCGTTTTACAAGCTACAAAATATATGGCAGTGGTGGACACGCTCTCTACTCACTCACCCGATGAGGAGTACATTGGGGAGCGACACCATCCGTCGATTTGGTCCGGTGATGCAGAGATGATTGAGCAATTTTACAGTTTCTCGGCAGAGATTAGACGGATAGAAAAGGAGATCGATAAAAGGAACCGTGATCGGACGCTCAGGAACCGGTGTGGGGCAGGAGTCTTACCTTACGAGTTACTTGCGCCTAGTTCCGAACCCGGTGTTACTTGCAGAGGGGTTCCAAACAGTGTGTCCACATA 2762 0.4417 MALAKEIMGSSLMERSSFVSSSKVLLNHKFQQKQNLLLVRPVLVSLENRKVLRSRKGVNGTVTAIGEDLVKASSSPVSAEKPVKFRVRAVVTVRNKIKEDLKDTLVKHLDALTDRIGRNVVLELISTEKDSKLMAPKKSNEAVLRDWSKKSNVKAERVNYTAEFIVDTDFGVPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQASKDHPGKRIFFSNKPYLPNDTPPALVALRDRELRNLRGDGKGVRKLSDRIYDYDFYNDLGNPDKGIQLTRPTLGDSDKYPYPRRCRTGRAPMDTDLSAESRVEKPLPMYVPRDEQFEESKQTTFSAMRLKALFHTLIPGLKASVSAENNDFNEFSDVDGLYSEGLPIKLQDELLKKLPLPKVVTKFQESSRAFLKYDTPKVISKDKFAWLRDDEFARQAIAGVNPVNIEKLKVFPPESKLDAQVHGPLESALKEEHILGQLNGMTVQQAIEENKLFIIDYHDVYLPFLDRINALDGRKAYATRTVFFLTPLGTLKPIAIELSLPPSGPSSLSKRVVTPPVDATTNWEWQLAKAHVCANDAGVHQLVNHWLRTHACMEPFILAAYRQLSAIHPIFKLLDPHMRYTLEINALARQGLINADGIIESCFTPGRYVMEISSAAYKNFWRFDKESLPADLIRRGMAEPDPTQPYGLKLLIQDYPYASDGLMIWSAIEDWVRAYVNHYYPNSALICNDKELQAWYDESVKVGHADLQNEPWWPTLNNSDDLVSILTTLIWIASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDEGDPEYEAFQADPQKYFLNALPSVLQATKYMAVVDTLSTHSPDEEYIGERHHPSIWSGDAEMIEQFYSFSAEIRRIEKEIDKRNRDRTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02214 920 Pfam PLAT/LH2 domain 154 222 IPR001024 GO:0005515
Bva02g02214 920 Gene3D PLAT/LH2 domain 51 227 - -
Bva02g02214 920 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 45 919 - -
Bva02g02214 920 Gene3D - 553 919 - -
Bva02g02214 920 Pfam Lipoxygenase 236 903 IPR013819 GO:0016702|GO:0046872
Bva02g02214 920 Gene3D - 228 330 - -
Bva02g02214 920 ProSitePatterns Lipoxygenases iron-binding region signature 2. 601 611 IPR020834 GO:0016702|GO:0046872
Bva02g02214 920 MobiDBLite consensus disorder prediction 277 302 - -
Bva02g02214 920 CDD PLAT_LH2 85 224 IPR042057 -
Bva02g02214 920 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 85 227 IPR036392 GO:0005515
Bva02g02214 920 MobiDBLite consensus disorder prediction 288 302 - -
Bva02g02214 920 SUPERFAMILY Lipoxigenase 228 919 IPR036226 -
Bva02g02214 920 PRINTS Lipoxygenase signature 556 573 IPR013819 GO:0016702|GO:0046872
Bva02g02214 920 PRINTS Lipoxygenase signature 574 591 IPR013819 GO:0016702|GO:0046872
Bva02g02214 920 PRINTS Lipoxygenase signature 594 614 IPR013819 GO:0016702|GO:0046872
Bva02g02214 920 PANTHER LIPOXYGENASE 45 919 IPR000907 GO:0016702|GO:0046872
Bva02g02214 920 ProSitePatterns Lipoxygenases iron-binding region signature 1. 574 588 IPR020833 GO:0016702|GO:0046872
Bva02g02214 920 Gene3D - 331 417 IPR027433 -
Bva02g02214 920 PRINTS Plant lipoxygenase signature 359 380 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 405 421 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 193 211 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 511 535 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 258 274 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 291 310 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 444 463 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 219 240 IPR001246 GO:0016491
Bva02g02214 920 PRINTS Plant lipoxygenase signature 832 846 IPR001246 GO:0016491
Bva02g02214 920 ProSiteProfiles PLAT domain profile. 101 223 IPR001024 GO:0005515
Bva02g02214 920 Gene3D - 418 551 - -
Bva02g02214 920 SMART LH2_4 85 224 IPR001024 GO:0005515
Bva02g02214 920 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 226 920 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02214 Bva-Chr2 22293904 22298563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02214 1 919 Acyl Lipid Metabolism Gene Families AT1G72520 70.563 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02214 K00454 - gmx:100793614 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02214 02 22293904 22298563 Bva02g02214 02 22293904 22298563 ECH