Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02197 ATGGACGTGGATATGGAGACTTCTCCCACCTATTTCGACCCGGAAAACCTCAACATCAGAGAACAATACCGCAGATACAGAAAAAGACACTCAACTTCGAGTACTTCAACCCCGCAAGAAATTTCAGCTTCAAAAACCGGTGAAGCTGGACAGTTGTATGATGGCCAAAGTATTCTTCATATTAAACGAGAGCCTGAGAGTTTTGATGCTGATTACTCAGAAGTTACACCTGCAAAGTCACCATATTCCTCCAAGAGTAGGTTGTCTACCAGTAGGCATAGAATCCCTGATGTGGGTGCTGGTTTTGACTCTGCACATCAGTCACTACAGGCTTGTAAGCTAGAGGGTGAAGTCTTGGGAGATGGTGCTGAAACCATCTTTGCTTTATTTGCATCCCTGCTTGATTCTGCTCTGCAAGATCCGATGTCAATTCCTGATCTAATACTAAGGTTTGAAGGGGCATGTCGAAGTGTTTCAGAGTCTATCAGGGATGGTTTAAATATAAGGCATCGAGTTGTTGAGGACAAATTGATGAGGCAGAAGGCTCAGCTCCTGCTTGATGAGGCTGCAACCTGGTCTCTCCTTTGGTATCTTTATGGGAAAGGAAATATATCTCTAACCTTAACTTGTCTCAAACTTACATGGACGGAAGAACTACCTAAAGAGTTAATCctgGTGCCAGTGACTTCTCACTTGGTGGCTTGTGAATTTGTTGCGGAGAACCATACACCTCAATTATTCCTCCGGATAGTCCAGTGGTTAGAATCTTTAGCTTCTAAGTCACTTGACTTGGAAGGCAAGCTGCGAGGATCTCATGTTGGTACATATCTACCCAGTTCTGGAGTTTGGCATCATACTCAACGTTACCTAAAGAAAGGAACTTCTGACATGAACATTGTTCATCACTTAGACTTTGATGCCCCAACACGTGAAAACGCTAATATTTTACCTAATGACAAGAAACAAAATGAATCACTTTTAGAAGATGTGTGGACACTTTTAAGGGCTGGAAGACTAGAAGAGGCATGTGAACTTTGCCGATCTGCTGGACAGcCATGGAGAGCTGCTACTTTAATCCCATTTGGAGGTTTGAGCCAATTTCCTTCTGTTGAAGCTCTGGTgaaaaatggtaaaaatagAACTCTGCAAGCCATTGAATTGGAAAGTGGTGTCGGTCATCAATGGCATCTCTGGAAATGGGCATCATATTGCGCATCAGAGaaaatagcagaGCTAGGTGGAAAATATGAAGCAGCTGTATTTGCAGCCCAATGTAGCAACCTAAAGCGGATGCTTCCACTATGCACAGACTGGGAgTCTGCATGCTGGGCAATGGCAAAATCTTGGCTAGATGTACAGGTGGATTTGGAAGTCATTCGTTCATTGCCAGGGGGAGAAGAGCAGCTCAGAACTTTTGGAGATGTGTTGTATGGAAGTCCTAGACGTGTTGATGTTCCCTTTGATGAGCCTTCAGGTGGACCCGAGAATTGGCCATTTCACGTTTTGAATCAGCAACCACAACAGCTTTCATCTCTTCTCCAGAAACTTCATTCAGGGGAAACGGTCCATGAAACTGTTACTAGACAATGCAAGGAGCAACAGCGGCAAATTGAGATGATTTTAATGGTGGGAGACATACCTCGTCTGCTGGACCTTATATGGTCATGGATAGCACCTTCAGAAGATGATCAGAATGTATTTCGGCCTCATGGAGATCCGCAAATGATTCGATTTGGTGCACATCTAGTGCTTGTGCTTAGATATTTACTTGCTGATGAAATGAAGGATACCTTCAGAGAAAAAATTCTGAATGTTGGTGATCTCATTCTTCATATGTATGCAATGTTTCTCTTTTCGAATCAACTTGAGGAATTGGTGGCCATATATGCTTCTCAGCTTGCTCGTCACCGATGTGTTGAACTCTTTGTGCACATGATGGAACTAAGGCTGAATAGCAGTGAACATGTCAAACACAAGATATTCCTTTCTGCTATGGAGTATTTACCATTTTCTCCTGTGGATGATTCTAAGGGcagttttgaagaaattatagAGAGGATATTGTTGAGATCTCGAGAGATCAAGGTTGCCAAATATGATAAGCTATCAGATGTTGCAGAGCAGCACAGGCTGCAGAGTCTTCAAAAAGCGAAGGTTATCCAGTGGCTTTGCTTTACCCCGCCATCTACAATTACTAACATTGAAGAAGTTAGTAAAAAACTTCTTCTCCGAGCACTGGCACATAGCAATATACTTTTCAGGGAGTTTGCTCTTATTTGTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCACACGATACTTGGTTTTCTTGCAGCACCCTTGAAACAGCTTTCAGAAACCCTTGACTTCTCGGAGGATAATATTGTGTCTGAGGATCTAAGAGAGTTCAAAGACTGGAGTGAGTATTACTCCTGTGATGCAACCTATCGCAATTGGCTCAAAATTGAATTAGAGAATGCAGAAGTCCCTGCCCCTGAACTCTCATTAGAGGAAAAGGAAGGGGCTATATCAGCGGGGAAGGAAACACTGAATGCATCTTTCTCACTGCTGGAAAGAAAAGAACCTTGGTTGGTTTCTTTTGACGATCATATAGAGTCAGCTGAACCTGTTTTTCTTGAACTTCATGCCACTGCAATGCTCTGCCTGCCGTCTGGTGAGTGTTTGTGTCCAGATGCCACTGTATGCACTACACTAATGGATGCCCTCTATGCATCAGCTGGTCATGAGGTTCTCCTAAGTCGACAACTAAAGGTGAATGTCTCTATATCATCAAGGGACAATTATTGCATTGAGGTTGTTCTTCGTTGCTTAGCCGTAATCGGTGATGGACTTGGCCCTCATATACCTGATGATGGTGGTATTCTCAGCAACATTATGGCTGCTGGTTTCAAAGGTGAACTTCCTCGATTCCAACCTGGAGTTACAATGGAGATATCCCGTTTGGATGCTTGGTATTCTGACAAAGATGGCTCTTTAGAGTGCCCGGCAACATACATTGTAAAGGGCCTATGTCGTAGGTGCTGTCTTCCAGAAATAATTCTTCGTTGCATGCAAGTTTCTGTTTCTCTTGCGGGATCAGAATTCCTGCCAGATTACCACGATAAGTTGATTGAACTTGTTGGCAACCCAGAAAATCGTTTCATTCACTTGTTTAGTCAACAACAGTTGCAGgaatttttattgtttgagcGGGAATACTCAATCTACAAGATGGAGCTTTCAGAGGAATG 3254 0.4244 MDVDMETSPTYFDPENLNIREQYRRYRKRHSTSSTSTPQEISASKTGEAGQLYDGQSILHIKREPESFDADYSEVTPAKSPYSSKSRLSTSRHRIPDVGAGFDSAHQSLQACKLEGEVLGDGAETIFALFASLLDSALQDPMSIPDLILRFEGACRSVSESIRDGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWYLYGKGNISLTLTCLKLTWTEELPKELILVPVTSHLVACEFVAENHTPQLFLRIVQWLESLASKSLDLEGKLRGSHVGTYLPSSGVWHHTQRYLKKGTSDMNIVHHLDFDAPTRENANILPNDKKQNESLLEDVWTLLRAGRLEEACELCRSAGQPWRAATLIPFGGLSQFPSVEALVKNGKNRTLQAIELESGVGHQWHLWKWASYCASEKIAELGGKYEAAVFAAQCSNLKRMLPLCTDWESACWAMAKSWLDVQVDLEVIRSLPGGEEQLRTFGDVLYGSPRRVDVPFDEPSGGPENWPFHVLNQQPQQLSSLLQKLHSGETVHETVTRQCKEQQRQIEMILMVGDIPRLLDLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLADEMKDTFREKILNVGDLILHMYAMFLFSNQLEELVAIYASQLARHRCVELFVHMMELRLNSSEHVKHKIFLSAMEYLPFSPVDDSKGSFEEIIERILLRSREIKVAKYDKLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNIEEVSKKLLLRALAHSNILFREFALICMWRVPAMPIGAHTILGFLAAPLKQLSETLDFSEDNIVSEDLREFKDWSEYYSCDATYRNWLKIELENAEVPAPELSLEEKEGAISAGKETLNASFSLLERKEPWLVSFDDHIESAEPVFLELHATAMLCLPSGECLCPDATVCTTLMDALYASAGHEVLLSRQLKVNVSISSRDNYCIEVVLRCLAVIGDGLGPHIPDDGGILSNIMAAGFKGELPRFQPGVTMEISRLDAWYSDKDGSLECPATYIVKGLCRRCCLPEIILRCMQVSVSLAGSEFLPDYHDKLIELVGNPENRFIHLFSQQQLQEFLLFEREYSIYKMELSEE 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02197 1084 PANTHER NUCLEAR PORE COMPLEX PROTEIN 1 1083 - -
Bva02g02197 1084 Gene3D - 705 899 - -
Bva02g02197 1084 MobiDBLite consensus disorder prediction 32 49 - -
Bva02g02197 1084 PANTHER NUP107-RELATED 1 1083 IPR007252 GO:0005643|GO:0017056
Bva02g02197 1084 MobiDBLite consensus disorder prediction 70 90 - -
Bva02g02197 1084 Pfam Nuclear pore protein 84 / 107 185 875 IPR007252 GO:0005643|GO:0017056
Bva02g02197 1084 MobiDBLite consensus disorder prediction 24 49 - -
Bva02g02197 1084 Gene3D - 282 432 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02197 K14301 - gmx:100786552 1666.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02197 02 22190286 22202897 Bva02g02197 02 22190286 22202897 ECH