Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02155 ATGATGCGGAAATTCGTTGCTGACAAAGCGAGGAGCGTTTTGCGCTGTTCTCTTCTGGATCGTCACTGTCGTTCTCTCTCTTCTGCTACTATTTCGGCTCCTGATTTCCGTTCTTCTTCAATGGATTCCTCTCCTTCTAAATCAAGTTTCCCAGTGACTCTCGAGAACATCAGCCAGAAGGTTTTAAAGTGTGAGTACGCTGTGAGAGGAGAAATCGTCTCACTTGCCCAGAAGTTACAAGAAGAGTTAAAGGCCAAGCCAGGCACTCATGCGTTTGATGAGattatttaCTGCAACATTGGGAACCCCCAGTCTCTTGGCCAACAGCCGATAACATTTTTCCGGGAGGTTCTTGCATTATGTGACCATCCAGTCATTTTGGACAAAAGTGAAACACAGGGTCTGTTCAGCACTGACTCAATACAGCGAGCTTGGGAGATTCTGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTAAGGGCCTTCGTGATACAATTGCTGCTGGAATTGAAGCCCGTGATGGTTTTCCTGCTGATCCCAATGACATTTTCTTGACTGATGGTGCAAGCCCTGCgGTCCATATGATGATGCAACTACTCATAAGATCAGAAAATGATGGTATCTTTTGTCCAATCCCTCAGTATCCTCTGTACTCAGCTTCAATTGCCCTTCATGGTGGCACCCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGTTTGGAAATATCTGAGCTCAAGAAGCAATTGGAGGCTGCCAAGTCCAAGGGTATAAGTGTAAGGGCCTTGGTTGTTATCAATCCAGGCAACCCAACGGGGCAGGTTCTTTCTGAGGAAAACCAGCAAAGAATTGTAGAATTTTGCAAGGAAGAAGGTCTGGTTCTTCTAGCTGATGAGGTATATCAAGAAAATGTTTATGTTCCGGAGAAGGAATTTCACTCATTCAAGAAGGTAGCTAGGTCTATGGGGTATGGTGAGAAAGATATCTCATTAGTATCTTTTCAGTCAGTCTCGAAAGGCTATTATGGGGAGTGTGGCAAAAGAGGAGGTTATATGGAGGTGACTGGGTTTGCTGCAGATGTGAGGGAACAGATATACAAAGTGTCATCTGTGAATCTTTGTTCTAATATCTCTGGTCAAATTCTTGCTAGCTTGGTCATGAGCCCACCTAAGGTTGGAGATGAGTCCTACGAGTCCTACTGTGCTGAGAAAGAAGGAATTCTATCATCCCTTTCTAGACGTGCAAAGACACTAGAAGAAGCTTTCAACAAATTGGAGGGTGTAACATGCAACAAAGCTGAAGGTGCAATGTATCTTTTTCCCCGAATTCGGCTGCCTGAAAAGGCAATCAAAGCAGCAGAGGCTGCAAACAGAGCTCCTGATGCCTTCTATTGCCAACGTCTGCTTAATGCTACAGGGATTGTTTTTGTTCCTGGTTCTGGTTTTAGACAGGTTCCTGGCACCTGGCACTTTAGGTGTACTATATTACCCCAAGAAGATAAGATTCCGGCCATTGTTAACCGCTTGACAGAGTTCCATCAAAAGTTCATGGATGAGTTCCGCGACTG 1589 0.4481 MMRKFVADKARSVLRCSLLDRHCRSLSSATISAPDFRSSSMDSSPSKSSFPVTLENISQKVLKCEYAVRGEIVSLAQKLQEELKAKPGTHAFDEIIYCNIGNPQSLGQQPITFFREVLALCDHPVILDKSETQGLFSTDSIQRAWEILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIFCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEAAKSKGISVRALVVINPGNPTGQVLSEENQQRIVEFCKEEGLVLLADEVYQENVYVPEKEFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFAADVREQIYKVSSVNLCSNISGQILASLVMSPPKVGDESYESYCAEKEGILSSLSRRAKTLEEAFNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAANRAPDAFYCQRLLNATGIVFVPGSGFRQVPGTWHFRCTILPQEDKIPAIVNRLTEFHQKFMDEFRD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02155 529 Gene3D - 106 156 - -
Bva02g02155 529 CDD AAT_like 144 518 - -
Bva02g02155 529 Coils Coil 415 435 - -
Bva02g02155 529 Gene3D - 157 403 IPR015421 GO:0003824
Bva02g02155 529 Gene3D Aspartate Aminotransferase, domain 1 55 527 IPR015422 GO:0003824
Bva02g02155 529 SUPERFAMILY PLP-dependent transferases 56 523 IPR015424 -
Bva02g02155 529 PANTHER BNAC05G13450D PROTEIN 32 528 - -
Bva02g02155 529 PANTHER ALANINE AMINOTRANSFERASE 32 528 IPR045088 GO:0008483
Bva02g02155 529 Pfam Aminotransferase class I and II 153 502 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02155 Bva-Chr2 21986178 21991662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02155 K00814 - twl:119982830 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02155 02 21986178 21991662 Bva02g02155 02 21986178 21991662 ECH