Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02111 ATGTCTTTCTCCGCAGCCAAGTGTGTGCAGCCCCTCCCTCTCAATTCCACCACTCCCAGATCCACTGAAAAGCCTCTCTCTTTTGATCCCTTCAGAACTAGCTCCTCCTTCCTTGGATCGACTCACAAGCTTCGCTTCAATGGTCTCAGTAAGACAGCTCAGCACAATTCCCACAGTCGATCCGCTGTTGTTGCTGTCTCCGATGTTGTTCaggagaaaaagacaaaagcaaTCTCCAATCTGCTTATCACGAGAGAGGAAGGATTGGAGCTCTACGAAGACATGGTGTTAGGTAGGGCTTTTGAAGACATGTGTGCCCAGATGTATTATAGGGGCAAAATGTTTGGTTTCGTGCACTTGTATAATGGCCAAGAAGCTGTGTCAACTGGGTTCATCAAGCTTCTTAAGAAAGAAGATTCTGTGGTGAGTACATATAGGGACCATGTTCATGCACTAAGTAAGGGAGTGCCAGCTCGTGCTGTAATGAGTGAGCTATTTGGAAAGGCTACCGGATGTTGCCGAGGTCAAGGTGGTTCAATGCATATGTTCTCTAAAGAGCACAATCTGCTTGGTGGGTTTGCCTTCATTGGTGAAGGAATTCCAGTAGCCACTGGGGCAGCATTTTCCACCAAGTATAGAAGGGAGGTATATAAAGATCCCAATGCCGATCAGGTGACGTTGGCATTTTTTGGAGATGGGACTTGTAATAATGGGCAGTTCTTTGAATGCCTAAACATGGCAGCTTTGTGGAAATTGCCAATTGTGTTTGTTGTGGAAAACAATTTGTGGGCTATTGGGATGTCCCATCTCAGGGCAACTTCCGATCCTGAAATATGGAAGAAAGGGCCAGCATTTGGAATGCCAGGGGTCCATGTAGATGGAATGGATGTTTTGAAGGTACGAGAGGTGGCAAAAGAGGCCATTGAAAGAGCCAGAAGAGGAGAGGGGCCAACTTTAGTGGAATGTGAGACCTATAGGTTTAGAGGACATTCATTGGCTGATCCCGATGAGCTTCGTGACCCTGCTGAAAAGAAACGGTACGCTGAAAGGGATCCCATCTCTGCATTGAAGAAATACATCTTTGAGAACAAATTAGCTAGTGAAGAGGAGTTGAAGGCCATAGATAAGAAGATTGATGAGATCATTGATGACGCTGTCGAGTTCGCAGATGAGAGCCCTCTTCCACTGCGCAGCCAGCTTCTGGAGAATGTCTTTGCTGATCCAAAAGGTTTTGGTATTGGACCAGATGGCAGGTACAGATGTGAGGATCCAAAATTCACCGAAGGCACCGCTCATGTCTA 1301 0.4589 MSFSAAKCVQPLPLNSTTPRSTEKPLSFDPFRTSSSFLGSTHKLRFNGLSKTAQHNSHSRSAVVAVSDVVQEKKTKAISNLLITREEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFSTKYRREVYKDPNADQVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKKRYAERDPISALKKYIFENKLASEEELKAIDKKIDEIIDDAVEFADESPLPLRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02111 433 CDD TPP_E1_PDC_ADC_BCADC 91 389 - -
Bva02g02111 433 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 86 406 IPR017597 GO:0004739|GO:0006086|GO:0043231
Bva02g02111 433 Pfam Dehydrogenase E1 component 94 394 IPR001017 GO:0016624
Bva02g02111 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 4 433 - -
Bva02g02111 433 Gene3D - 39 414 - -
Bva02g02111 433 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 83 408 IPR029061 -
Bva02g02111 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02111 Bva-Chr2 21757782 21760814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02111 2 433 Acyl Lipid Metabolism Gene Families AT1G01090 78.472 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02111 K00161 - qsu:112008527 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02111 02 21757782 21760814 Bva02g02111 02 21757782 21760814 ECH