Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02110 ATGCCAAAGAAGTTTGTTATAGCTGAATCAACTTCTATGGAGCTCGACCTCGATTCCTTTCTTGATTCAGTAACCTCCAGCGACGAAGATAAGGACAACGGAATCGACAGCGAGCTTCGCTCGGTTCGTTTCCGGACTATTGACGAAATTCTGAATGATTGTGATACTTCTTCTTCGTCGTCGCCACTGTCAAATCCTTCCTCTCCGTCGCATTTCCGCCATAGTCGCCGCTCCTCAGATCTTTCCGTTAACAGACAGGACTCAAACTCCCTTAAAGATGCCGTTTTCAGCAATAAATCAGTCTCTGAATTCCCAATTGGAGAAACTCAGAAGAATTCGGAAGCTCAGGGGGCGGCCCAGTTGGGTGAAAAGGTAGTTCAGTCCAGAACGAGATCGATTTCTCGGGTGAAACCTGTTGAATTATCGGATAACCCGTTTCGCCGGGCTTCTCGGCCATTCCCATCTCTGTTTCGTGGGGTGAGACCAAATGCGAAACCAGGTGCGGCGCtggctgctgctgctgcttctgCTAGATCCATTCCTACACCTCATGCAGCAACGATTAAGTCAATGAGGACAGGGTGTGGGACTTTTCATAAAGCTCCGGCTAGTGGTGAAGTGAGCTCAATCATCGGTGACGATTCTGATATTTCTTCTAATGGTGAATTAGGTGGGGCGGGTCCTCAAATTAGTATGAAGTTAGAGGAAGATGAGGAGAAATTTGACAAGTCTCAGTCTTACATGATTGATCAGATTGATGGATTGTCTAGTAAAGTTGAGACTCTTGAGAGTAAGAAAGAGATCAGCGAGAGTATTCCCAATGAGCGTTTTGGTAATGAAGCAGAAATTGCAACTGAAGTGGATGATTCAGAGGCTGGTAATGCTACTATCGAGGCACATGATGATTATTCCCTTAAAGTTAAGGAGAACAGGAATTTGGATGAGTATTCCGCTATTTCACGCCCCAGTGAAGTTGAAGACGAGAAAGAAGCATCCATTTCcactaaagaaaataattctaaaagagATATGAATTCTGCACTTTTCAGTGCTAAAGATAATGATTTTAATGAAGAAGCTAGTTCTTATCATGATACCGGTAATAACGGAATCGCTGATGATGGGTTGAAGGTTGCAGGTTTTGAAACAGAAGAACTAGTGAATGGCAGTACAAGTATCAAAGATTATGAGAACAAGGTGGCTGTTGGTGGCACTGATGATGGTAGTTCAGTAAGCGATGTTGATGAGCTTGTGGAAGAGAGACTTGGGCAACTGAAAAGCATAAGAGCTAGTAGAAGAGCAGAAAAAAATTCCAAGGCTTCACTGAAGCCGCTCGACTTAGCTGAAGAACTAGAGAAGAAGCATGCTTCTACTGGTTTGCACTGGGAAGAGGGGGCCGCTGCTCAGCCAATGAGGCTGGAGGGTGTTCGGAGGGAGTCCACAACATTGGGATATTTTGATGTTAATGCTGACAATGCCGTTATAATGGCCATTTCATCCTACACATTCAGGCGTGAACATGGTTCCCCACAAGTCTTGGCAGTTCATGCTAACTACATTGCAGTAGGAATGATGAAAGGCCTCATTGTTGTAATCCCTAGTAAATATTCTACTTATCACGCTGACAACGTTGATGGAAAGCAGATGTTGATGCTTGCTATGCAAGGTGATTGGTTACATCCTCCAGTAACTTCCATGTCTTTCAATCAGCAAGGAGACCTGCTTTTAGCTGGTTATGGTGATGGTCATGTTACTATCTGGGATGTACAGAAAGCTGTGGTTGCAAAAGTTATTAGTGGTGAGCATACAGCACCAGTAGTGCACACATTGTTTCTGGGACAAGATCCTCAGACTACTCGTCAATTTAAAGCAATCACTGGTGACAGTAAGGGTCTGGTTCTCTTACATAGTTCCTCAGTGGTTCCTTTGCTTAATAGATTCTCCATCAAAACTCAGTGTCTGCTTGATGGGCAAAGAACGGGCATTGTGTTATCAGCTTCACCACTCCTTTTAGATGAAGTGGGTGGGAGTGCTTCACCTTATTCCCAGGGAAACACTGTGGCCTCAACCAGCAGTATCAGTAGCATGATGGGAGGAGTTGTTGGGGGAGATGCAGGTTGGAAGCTCTTTAACGAAGGTTCTTCTTTGTTTGAAGAAGGTGTGGTCGTATTTGTCACCCATCAAAATGCTCTAGTGGTAAGGCTGACTCCTACAGTGGAAATCTACACCCAGTTCTCTAAGCCAGATGGAATTCGGGAGGGTTCTATGCCATACACTGCATGGAAATGCATATCACAACCTCAAAATATGCCTGTGGAAGCTGTAGAAAGAGTTTCATTGCTCGCAATTGCTTGGGATAGGAAAGTTCAGGTTGCAAAGTTGGTCAAATCAGAACTAAAAGTATATGGAAAATGGTCTCTTGACAGTGCCGCTATAGGTTTGGCCTGGTTGGATGATCAGATGCTTGTAGTTCTGACATCAACTGGACAACTCTACTTATTTGCAAAGGATGGGACTTTGATTCACCAAACGAGTTTTGCTGTAGATGGTATTACAGGAGATGATCTAGTTGCTTATCATACTCActtcattaatatatttggAAACCCTGAGAAAGCCTATCATAACAGTGTTTCTATAAGAGGAGCTTCTATTTATATACTCGGAAGGACAAGTCTTGTTGTTTCCCGTCTTCTCCCTTGGAAAGAGAGAATTCTGGTTTTGCTGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAACGACCCTTTATGATGGCCAAGCTCACGGGGTTGCTGACCTTCCTAGAAGCTTGGATGCTGTACACGAGGCTATAATGCCTTTCTTGGTGGAGTTGCTTACGTCATATGTTGATGAAGTTTTCTCCTATATCTCAGTGGCATTCTGCAATCAAATTGGAAAACTGGAACAATTTGACGACTCAAATAGTAAAAGCACTTCTGTGCATTCTGAGATAAAAGAGCAATACACCCGTGTTGGTGGAGTTGCTGTTGAATTCTGTGTCCATATCAAAAGGACCGACATcctttttgatgaaattttcttgaagTTCATGAATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAACCATACATTTTAAAGGACATGCTTGGATCTCTACCGCCAGAGATTATGCAAGCACTGGTAGAGCATTATAGCAGCAAAGGGTGGTTACAGCGGGTTGAGCAATGTGTACTTCATATGGACATCTCTTCCTTGGATTTTAATCAGGTTGTCAGATTGTGCCGTGAGCATGGACTATATAGTGCCCTGGTGTATCTCTTTAATAAAGGATTGAATGATTTTAGGGCGCCTTTAGAAGAGCTTTTTGCAGTTTTACTACATAGTCAAAAGGAAAGTGCCACTGCACTTGGGTATAGAATGCTGGTTTATCTGAAGTACTGCTTTACAGGTCTTGCTTTTCCACCagGGCGTGGAACTGTTCCTCCTACACGCATGCCATCTCTTAGAAAAGAACTTGTTCAGTTTTTGTTGGAGGACTCTAATGCTCCAAAATCCCAAACAAATTCAGACTTGATTTCCAAAGGACAATACCTGAATCTATATCATCTCTTAGAGTTAGATACAGAAGCTACATTAAATGTTCTCAGATGCGCTTTCATAGAAGATGAACTTTCAAATGCCCGCTCATCTTCACTGGATTCAGTTGGCAGTGACATTGAGgatacagaaaaagaaaatgatagtgTCCctgaaattcaaaatcttttggTTCAGAATACTGTAGATGCTATCATTTACATCCTTGACAAGGATGTCTTGCCATCAGATGCAACCTCCCAAGGTGGTGATGATGGATTGGTAAAAGAGTGGCCTTCGATGAAGGACATAGGTCATCTGTCTGAGTTCATTGCATATTATGTTTCCCTCCTGCAAGCTAAAGTCTCAAAGGGTGTACTGTGTCAAACAATTGAATATATGACTTCAGAAAGTTACTTCCCAAATACTGTTACCATACATAGTTCAACTgccagaaaaagagaaaagcaggTGCTTGCACTTCTGGAAGTATTGCCTGAATCAGACTGGGAAGCATCATATGTGCTAAACCTATGTGAGAGAGTACAATTTCACCAGGTTTGTGGATTCATTCATACAATCAGGCATGAGTATGTGGCTGCATTGGATAGCTACATGAAAGATGTAAATGAACCTATCCATGCCTTCTCATTTATCAATAGAACATTAGTACAGCTAAGTGACAAGGACCATGCAGCTATTCGATCAGCAATCATATCTCGGATTTCTGAGCTGGTTGAATTAAGCAGGGAGGGTGCATTCCATATGGTTATCAGTCATTTCATTGATGAGAATTCACGTATCATCAGTGAGCTTCACTCTCATCCAAGAAGTCTTTTCCTTTATCTAAAGACACTCATTGAGGTTCACTTATCTGGTACCCTCGACTtctcaaaattaagaaaggatAGCATTATGAATGTACCCAATGGAACGTGTGTTAAGGATCACGCCCAAGGACTCGATGCTTACttagaaaatatatctaatttcCCTAAGTATATTCGAGAAAGTCCTCTTCATGTGACTGATGATCTTATTGAGCTTTATCTGGAGCTATTATGCCAGTATGAAGGTGGTTCTGTCCTCAAATTTTTGGAAATGTTTGATAGCTATCGCGTGGAACATTGTTTACGCCTGTGCCAGGAATATGGAATCATAGATGCTGCTGCATACTTATTAGAAAGAGTTGGTGATGTTGGTAGTGCTCTTTTACTTACACTTTCTGGTCTGAATGATAAGTTCACTGAGCTTGGTGCTGCTGTGGAAGCTGTAGTTTCAAATAAGCCCCTGGGTGGTTCTTCCCATAAGGAAGTATTTAACACTGTTTTAAGAATGAAAGAGGTGAATGacataaacaatttattaaatgCCTGTATTGGACTGTGCCAGCGGAACACCCCTCGTCTAAATCCAGAGGAGTCTGAGGCACACTGGTTTAGATTACTTAACTCGTTTTGTGCGCCATTGATAGATTCATATTCTCATGAGAAGAAATCTGAAAGAGAATATTATCTTGGAATGCTTGCTGGATCAGCTGATTCACAAGTGGACGAGGACACAGGAAAAAGCAGATGGAAAATCCCAAAATCTCATAATGGTGCTCATATCTTGAGGAAATTGTTTTCCCAGTTTGTCAAGGAGATTGTTGAGGGAATGATTGGTTATGTTCACCTTCCAACTATCATGTCCAAACTCCTCTCTGATAATGGTAACCAAGAATATGGCGATTTCAAACTAACGATATTGGGGATGCTCGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCTAAATCCTTGATCGAGGATGATACCTTTTACACAATGAGTTTGCTCAAGAAAGGGGCTTCTCATGGCTATGCTCCCCGGAGCCTAGCATGTTGTATTTGTAATGGCATCCTTACAAAGAGCTCTTCTACTTCTGCGATTCGAGTTTTCAACTGTGGTCACGTAAGTCATCTCCAATGCGAAGCTTTAGAAAGCGAGTCATCAAGTGCGGCCACTTCATCTGGATGCCCTATATGCATGCCTAACAAAAAATCTCAGCGGTCCAGAAACAAATCAGTCATTGCACAAGACGGCTTGGTGAAAAAATTCTTATCTAGGCGCCAACACCCGCATGGAAGTATTATTCATCCAAATGAAAGGGATTTATTCGAGAATATGTATGGATCTCAACAGATACCACGGTTTGAGATCTTGAGCGGCTTGCAAAGTAATCAGAGGTTTATCCAAATAGAAAACTTGCCTCAGTTGAGGCTTGCACCACCTGCTGTATACCATGAAAAGGTGAGTAAAGTGGCAGGTCCTCTTACTGGAGAAAGTATCAATGGTGCTGCCattgaagagaaacaaagtaGAAGCAGGCTATCCAGGGAGCTTAGAGTTAAGGGTTCATCAATTCGGTTCCCTTTAAAATCAAGCATATTCGGCAAAGAGAAAACCAGTAGGCAGTG 6032 0.4108 MPKKFVIAESTSMELDLDSFLDSVTSSDEDKDNGIDSELRSVRFRTIDEILNDCDTSSSSSPLSNPSSPSHFRHSRRSSDLSVNRQDSNSLKDAVFSNKSVSEFPIGETQKNSEAQGAAQLGEKVVQSRTRSISRVKPVELSDNPFRRASRPFPSLFRGVRPNAKPGAALAAAAASARSIPTPHAATIKSMRTGCGTFHKAPASGEVSSIIGDDSDISSNGELGGAGPQISMKLEEDEEKFDKSQSYMIDQIDGLSSKVETLESKKEISESIPNERFGNEAEIATEVDDSEAGNATIEAHDDYSLKVKENRNLDEYSAISRPSEVEDEKEASISTKENNSKRDMNSALFSAKDNDFNEEASSYHDTGNNGIADDGLKVAGFETEELVNGSTSIKDYENKVAVGGTDDGSSVSDVDELVEERLGQLKSIRASRRAEKNSKASLKPLDLAEELEKKHASTGLHWEEGAAAQPMRLEGVRRESTTLGYFDVNADNAVIMAISSYTFRREHGSPQVLAVHANYIAVGMMKGLIVVIPSKYSTYHADNVDGKQMLMLAMQGDWLHPPVTSMSFNQQGDLLLAGYGDGHVTIWDVQKAVVAKVISGEHTAPVVHTLFLGQDPQTTRQFKAITGDSKGLVLLHSSSVVPLLNRFSIKTQCLLDGQRTGIVLSASPLLLDEVGGSASPYSQGNTVASTSSISSMMGGVVGGDAGWKLFNEGSSLFEEGVVVFVTHQNALVVRLTPTVEIYTQFSKPDGIREGSMPYTAWKCISQPQNMPVEAVERVSLLAIAWDRKVQVAKLVKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQLYLFAKDGTLIHQTSFAVDGITGDDLVAYHTHFINIFGNPEKAYHNSVSIRGASIYILGRTSLVVSRLLPWKERILVLLKAGDWMGALNMATTLYDGQAHGVADLPRSLDAVHEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKLEQFDDSNSKSTSVHSEIKEQYTRVGGVAVEFCVHIKRTDILFDEIFLKFMNVQQRETFLELLEPYILKDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLNDFRAPLEELFAVLLHSQKESATALGYRMLVYLKYCFTGLAFPPGRGTVPPTRMPSLRKELVQFLLEDSNAPKSQTNSDLISKGQYLNLYHLLELDTEATLNVLRCAFIEDELSNARSSSLDSVGSDIEDTEKENDSVPEIQNLLVQNTVDAIIYILDKDVLPSDATSQGGDDGLVKEWPSMKDIGHLSEFIAYYVSLLQAKVSKGVLCQTIEYMTSESYFPNTVTIHSSTARKREKQVLALLEVLPESDWEASYVLNLCERVQFHQVCGFIHTIRHEYVAALDSYMKDVNEPIHAFSFINRTLVQLSDKDHAAIRSAIISRISELVELSREGAFHMVISHFIDENSRIISELHSHPRSLFLYLKTLIEVHLSGTLDFSKLRKDSIMNVPNGTCVKDHAQGLDAYLENISNFPKYIRESPLHVTDDLIELYLELLCQYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDAAAYLLERVGDVGSALLLTLSGLNDKFTELGAAVEAVVSNKPLGGSSHKEVFNTVLRMKEVNDINNLLNACIGLCQRNTPRLNPEESEAHWFRLLNSFCAPLIDSYSHEKKSEREYYLGMLAGSADSQVDEDTGKSRWKIPKSHNGAHILRKLFSQFVKEIVEGMIGYVHLPTIMSKLLSDNGNQEYGDFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGYAPRSLACCICNGILTKSSSTSAIRVFNCGHVSHLQCEALESESSSAATSSGCPICMPNKKSQRSRNKSVIAQDGLVKKFLSRRQHPHGSIIHPNERDLFENMYGSQQIPRFEILSGLQSNQRFIQIENLPQLRLAPPAVYHEKVSKVAGPLTGESINGAAIEEKQSRSRLSRELRVKGSSIRFPLKSSIFGKEKTSRQ 2010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02110 2010 SUPERFAMILY WD40 repeat-like 501 833 IPR036322 GO:0005515
Bva02g02110 2010 MobiDBLite consensus disorder prediction 53 72 - -
Bva02g02110 2010 MobiDBLite consensus disorder prediction 320 337 - -
Bva02g02110 2010 MobiDBLite consensus disorder prediction 82 132 - -
Bva02g02110 2010 MobiDBLite consensus disorder prediction 53 132 - -
Bva02g02110 2010 Pfam Golgi CORVET complex core vacuolar protein 8 1033 1217 IPR025941 -
Bva02g02110 2010 ProSiteProfiles Trp-Asp (WD) repeats profile. 563 597 IPR001680 GO:0005515
Bva02g02110 2010 SMART ring_2 1819 1867 IPR001841 -
Bva02g02110 2010 ProSitePatterns Trp-Asp (WD) repeats signature. 575 589 IPR019775 -
Bva02g02110 2010 MobiDBLite consensus disorder prediction 320 344 - -
Bva02g02110 2010 PANTHER - 400 1937 - -
Bva02g02110 2010 PANTHER VACUOLAR PROTEIN SORTING VPS41 400 1937 IPR045111 GO:0006623
Bva02g02110 2010 ProSiteProfiles Zinc finger RING-type profile. 1819 1867 IPR001841 -
Bva02g02110 2010 SUPERFAMILY RING/U-box 1812 1868 - -
Bva02g02110 2010 Gene3D - 482 642 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02110 Bva-Chr2 21745751 21756509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02110 K20178 - gmx:100780869 2586.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02110 02 21745751 21756509 Bva02g02110 02 21745751 21756509 ECH