Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02109 ATGGCAACAGTGACAGCTTCGAGCAATTTTGTACCCAGAAGTTCTCATGTCAATTATGGACCAACAGTTTCATCTGAGTCTAAAGTGACACCGATTAGACTTGGATTTTTGAAGCAGACAATTAGTCACAATGGGTTAAGAGTTCTTAACCCAGTGGATGAGCTAAACAGAAACACAGTAAAAGTTAATGCAAGGAAAACTAAATTGGAAGCAATTCAGAGTAAGAATGCCAGGCCAGCAGGTAAGATTATATGTGGGATGAATTTGATCTTTGTGGGAACAGAGGTCGCACCGTGGAGCAAAACTGGTGGGCTTGGAGATGTTCTTGGAGGTCTCCCACCAGCGATGGCAGCTAATGGGCATCGAGTTATGACAATAGCTCCGCGGTATGATCAGTACAGAGATGCATGGGACACAGGTGTTATAACTGAGgTAAAAGTCGGAGACAGAACTGAAAAAGTTCGGTTCTTCCATTGCTACAAAAGAGGTGTTGATCGTGTCTTTGTGGATCATCCCATGTTTCTTGAAAAGGTGTGGGGCAAAACTAAAACCAAACTTTATGGGCCTACGGCGGGAGAGGATTACGAAGATAACCAACTACGGTTCAGCTTGTTCTGCCAGGCAGTTTTGGAAGCACCAAGAGTTCTGAATCTCAAAGGCAGCAAATATTTCTCTGGACCTTACGGCGAAGATGTCATTTTCATTGCCAATGATTGGCACACTGCCCTTCTTCCTTGCTACATGAAATCTATGTACCAATCATTTGGCATCTACAAGAATGCCCGTGTAGTCTTTTGCATCCACAACATCGCTTACCAAGGCAGATTTGCATTTGGAGACTTTTCACTTCTGAATCTCCCTGATCAATTTAGAAGTTCCTTTGACTTCATTGATGGGCATGTAAGACCAGTCATAGGAAGGAAAATCAATTGGATGAAAGCTGGAATTTTAGAATCACATCAGGTGTTAACTGTTAGTCCATACTATGCCGAAGAACTTCTTTCAGGCCCAGATAAAGGAGTTGAGCTCGACAACATCCTTCGTAGAACTGGCATTATTGGAATTGTGAATGGCATGGATGTGCAGGAGTGGAATCCATCAACAGACAAATATATTCTTGTCAAGTACACTGCTGAAACTGTAACGATGGCAAAGGCTCTTTTGAAAGAAGCCCTTCAAGCAGAAGTTGGATTGCCAATAGATAGAAATATTCCTCTCATTGGTTTCATTGGTAGACTTGAAGAACAAAAGGGTTCTGATATTCTTGTAGCAGCCATTCCACACTTTATCAGAGAGAAAGTTCAGATAGTAGCACTTGGAACAGGGAAAAGACAAATGGAAAAGCAGCTTCAGCAGCTAGAGATTTTATACCCAGACAAGGCCAGAGGAGTAGCAAAATTCAATGTTCCCCTAGCTCATACGATAATAGCCGGAGctgattttatattagttcCCAGCAGATTTGAACCTTGTGGTCTCATTCAGTTACAAGCCATGCGCTATGGAACTGTGCCAATAGTTGCCTCAACTGGTGGGTTAGTGGACACAGTCAAAGAAGGTTACACAGGATTTCAAATGGGTTCCTTCAATGTTGAATGTGATGCTGTGGATCCTGCGGATGTAGCTGCCTTGGCTAAGACTGTCATAAGAGCCCTTGCTGTCTATGGAACTCTGGCTTTCGCCGAAATGATCAGAAATTGCATGGCTCAGGATCTTTCATGGAAGGGGCCTGCTAAAAAGTGGGAGGAGGTTTTACTAAGCTTGGGAGTTGCTGGCAGTGAACCTGGAATTGATGGGGAAGAAATTGCTCCAcaggcaaaagaaaatgtggcTACTCCTTG 1841 0.4248 MATVTASSNFVPRSSHVNYGPTVSSESKVTPIRLGFLKQTISHNGLRVLNPVDELNRNTVKVNARKTKLEAIQSKNARPAGKIICGMNLIFVGTEVAPWSKTGGLGDVLGGLPPAMAANGHRVMTIAPRYDQYRDAWDTGVITEVKVGDRTEKVRFFHCYKRGVDRVFVDHPMFLEKVWGKTKTKLYGPTAGEDYEDNQLRFSLFCQAVLEAPRVLNLKGSKYFSGPYGEDVIFIANDWHTALLPCYMKSMYQSFGIYKNARVVFCIHNIAYQGRFAFGDFSLLNLPDQFRSSFDFIDGHVRPVIGRKINWMKAGILESHQVLTVSPYYAEELLSGPDKGVELDNILRRTGIIGIVNGMDVQEWNPSTDKYILVKYTAETVTMAKALLKEALQAEVGLPIDRNIPLIGFIGRLEEQKGSDILVAAIPHFIREKVQIVALGTGKRQMEKQLQQLEILYPDKARGVAKFNVPLAHTIIAGADFILVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGYTGFQMGSFNVECDAVDPADVAALAKTVIRALAVYGTLAFAEMIRNCMAQDLSWKGPAKKWEEVLLSLGVAGSEPGIDGEEIAPQAKENVATP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02109 613 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 613 - -
Bva02g02109 613 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 87 586 IPR011835 GO:0004373
Bva02g02109 613 Pfam Glycosyl transferases group 1 401 525 IPR001296 GO:0016757
Bva02g02109 613 Gene3D Glycogen Phosphorylase B; 89 579 - -
Bva02g02109 613 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 613 - -
Bva02g02109 613 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 585 - -
Bva02g02109 613 Gene3D Glycogen Phosphorylase B; 360 570 - -
Bva02g02109 613 Pfam Starch synthase catalytic domain 89 348 IPR013534 -
Bva02g02109 613 Hamap Glycogen synthase [glgA]. 87 588 IPR011835 GO:0004373
Bva02g02109 613 CDD GT5_Glycogen_synthase_DULL1-like 88 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02109 Bva-Chr2 21741432 21745219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02109 1 613 Glycosyltransferase AT1G32900 70.617 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02109 K13679 - gmx:100037476 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02109 02 21741432 21745219 Bva02g02109 02 21741432 21745219 ECH