Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02066 ATGGCTAACTTAGTCACCTCACTTATGCTGTGGCTAAGTCTAATATCAACTCTCTACAATGTGAAACTTTTGGCACAGGACACACCCAGgacaggatcaaccaggttcTATGATTTTAAGGTACAAACCAAGAGAGTTTCTAAACTTTGCAACACAAAGGACATTGTCACAATCAATGGCATGTATCCAGGACCAGTTGTTTATGCCCAAGAAGACGATAGAATCATTGTCAATGTTACCAACAGGACACCTTACAATGTGACAATCCACTGGCATGGCGTCCGGCAAAGGCTATCCTGCTGGTATGATGGTCCTTCATATATTACACAATGTCCAATTCAAGCAGGGCAGAGTTTCACCTATAATTTCACAGTGACCAAGCAGAAGGGTACCTTTTTTTGGCATGCTCATGTTTCTTGGCTCAGAGGAACGGTGTATGGTGCCATGATCGTTTATCCAAGAGCAGGGTTACCTTATCCGTTCAAGACTCCATACGAGGAACACATAATCATACTAGGGGAATATTGGATGAAGGATCTTGTGGAGATTGAAAATGCCACTCTTGCAAGTGGAGGACCTCCTCCAACGGCAGATGCATACACCATAAACGGTCATCCAGGCCCCAACTACAATTGCTCGACTAAtgATGTCCATCAAATTGATGTGGTTCCTGGGAAGACCTATTTGTTAAGACTAATTAACGCGGGTCTAAACACGGAGAACTTCTTCGCCATTGCTAATCACAATTTAACAATCGTGGAGGCTGATGCTGAATACACGAAACCATTCACGACGACTGTGGTGATGCTTGGACCAGGGCAGTCATTGAATATTTTAGTCACTGCAGATCAACCAGTAGGAAAATACTCCATGGCTGTGGCACCTTATAAGAACGGCAGAATtgtaaattatcaaaatacttCAGCCATTGCCTACTTCCACTATATAGGAGCTGCAGAATATAGCTTATATTTACCAGCTAAATTACCTAAACTGGATGATGGTCTGGCTGTTAAGACAGTGATGGATGGATTAAGGAGCCTAAATCAAGTCAATCTTTTGAAAGAAACTGACGAAAACCTATTCATCACCATTGGATTGAATGTCCAGAAGTGTCACTCAAAGACACCAAAGATAAACTGCCAAGCCTTCAATAAAGGTGTCCTGTCAGCTTCAATGAACAATATAACTTTCGTTCAACCCCGGATTTCAATCTTGGAAGCTTATTATAAGAAGATTAATGGATCATATACTGAAGATTTTCCTGATGCACCTGTCAAGTTCTATGACTTTGTTAATGGGGCTCCCAATAACATGCCATACGACACAGAGTCATTAAAAGGGACTAGAACAAAGGTCCTGGAATATGGAAGCAAGGTGCAAATCATTCTGCAGGACACTGGCACAGTCAACACTGAAAACCACCCAATTCACCTTCACGGCTATAGCTTTTATGTCATAGGGTATGGCACAGGGAACTATGACACACGAACTGCACAATTCAACTTGGTGGATCCCCCCTGCATGAACACAATAGGTGTTCCAGTTGGTGGATGGGCAGCAATTCGCTTCGTTGCTGACAATCCAGGTGTATGGTATATGCACTGTCACATGGAAATACACCTGTCATGGGGGTTAGGGATGGTCTTTATAGTAAAGAATGGCAAAGGAGAGCTAGAGTCCTTACCAAATCCTCCACCAGACCTGCCGCAATGTTA 1718 0.4203 MANLVTSLMLWLSLISTLYNVKLLAQDTPRTGSTRFYDFKVQTKRVSKLCNTKDIVTINGMYPGPVVYAQEDDRIIVNVTNRTPYNVTIHWHGVRQRLSCWYDGPSYITQCPIQAGQSFTYNFTVTKQKGTFFWHAHVSWLRGTVYGAMIVYPRAGLPYPFKTPYEEHIIILGEYWMKDLVEIENATLASGGPPPTADAYTINGHPGPNYNCSTNDVHQIDVVPGKTYLLRLINAGLNTENFFAIANHNLTIVEADAEYTKPFTTTVVMLGPGQSLNILVTADQPVGKYSMAVAPYKNGRIVNYQNTSAIAYFHYIGAAEYSLYLPAKLPKLDDGLAVKTVMDGLRSLNQVNLLKETDENLFITIGLNVQKCHSKTPKINCQAFNKGVLSASMNNITFVQPRISILEAYYKKINGSYTEDFPDAPVKFYDFVNGAPNNMPYDTESLKGTRTKVLEYGSKVQIILQDTGTVNTENHPIHLHGYSFYVIGYGTGNYDTRTAQFNLVDPPCMNTIGVPVGGWAAIRFVADNPGVWYMHCHMEIHLSWGLGMVFIVKNGKGELESLPNPPPDLPQC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02066 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Bva02g02066 572 SUPERFAMILY Cupredoxins 163 324 IPR008972 -
Bva02g02066 572 Gene3D - 16 153 IPR008972 -
Bva02g02066 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Bva02g02066 572 SUPERFAMILY Cupredoxins 32 176 IPR008972 -
Bva02g02066 572 Gene3D - 158 328 IPR008972 -
Bva02g02066 572 Gene3D - 371 572 IPR008972 -
Bva02g02066 572 PANTHER LACCASE-6 16 572 - -
Bva02g02066 572 Pfam Multicopper oxidase 166 317 IPR001117 -
Bva02g02066 572 TIGRFAM laccase: laccase 33 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Bva02g02066 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Bva02g02066 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Bva02g02066 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Bva02g02066 572 PANTHER MULTI-COPPER OXIDASE 16 572 IPR045087 -
Bva02g02066 572 SUPERFAMILY Cupredoxins 382 572 IPR008972 -
Bva02g02066 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Bva02g02066 572 Pfam Multicopper oxidase 444 555 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02066 Bva-Chr2 21472599 21475432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02066 K05909 - gmx:100789406 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02066 02 21472599 21475432 Bva02g02066 02 21472599 21475432 ECH