Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02064 ATGCCAGGCTTAGTTGCAGCGAGAACCCCTTCTCATCAGGACCAGACGCGGGACGAGTGCGCCAATGGCGGTGAACGCCGAACCCCATCGCTACTTCTAAAGATAAACCCATCGCTATCACCTACCTCTTCACGGGGCTTCAAAACGACGCTGGAAAAGCTAGCCATGGATGAGTCGTCCCTCGACAACCCGGATCTGGGTCCCTTTCTTATGAAGCTCGCCCGAGATACGATAGCTTCGGGTGAGAGCCCGATTAAAGCGTTGGACTTCGCGATCCGGGCGTCAAAGTCATTTGAGAAGGTTCCGAGTTCGGGTTTGGAGCTCTCTATGAGTTTACAAGTTGTTGCGGCGATTTACAGCAGCTTGGGGCGGTTCGGCGAGGCAATACATGCCTTGGAGCGGTCCATTGAGTGTCCGGATGTTGGTAAGGGGTCGGATCACGCACTGGCGAAGTTCTCCGGGTACATGCAATTAGGCGATACGTACTCGATGGTTGGGCAGCTGGACCGGTCCATTTTGTGTTATGAGTCGGGTTTGAAGTTCCAAATTGAAGCCCTTGGCAAGTCGGATCCAAGAGTGGCAGAAACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCAATGCAATTCGACGAGGCTGAGAACTTCTGCAAGATGGCCCTTGAAATTCACAGGGAGCATAGCTCAACTGCTTCCATTTCAGAAGCAGCTGATCGGCGTCTTATGGCCCTCATTTGTGATGCAAAGGGAGATTATGAATTAGCACTAGAGCACCTTGTCCTAGCTAGCATGTCAATGATTGCTAATGAGCAAGATAATGAAGTTGCAGCCATTGATGTTAGCATTGGTGATATTTACTTGTCACTCTGTCATTTTGATGAAGCTGTTTTTGCCTACCAGAAAGCACTCACCGTGTTCAAATCGACACAGGGTGAAAGTCACAGCTCTGTAGCATTAGTATACATTCGCCTTGCTGACCTTTACTACAAGACAGGAAAACTACGGGAGTCCAAATCCTATTGTGAAAATGCCTTGAGAATATACAGCAAACCTGTGCCTGGAACAACTGCTGAGGAGATTGCCAGTGGGTTGACTGAAATCTCTGCCATCTATGAAGCTCTGAATGAGCCTGAGGAGGCACTGAAGCTCTTGAAGAAGGCAGTGAAGGTATTGGGCGATGCACCGGGAAAGTATAGAACAATAGCAGGAATAGAAGCACAAATGGGAGTGATATTCTACATGGTTGGAAGGTACATGGAGGCGAGGAACTCTTTTGAGAATGCTATCACAAAGCTACGAGCCAGTGGGGAGAAGAAATCTGCTTCTTTTGGAGTTGTGTTGAACCAGATGGGCCTTGCTTGCGTGCAGCTTTATAAAATAGGGGAGGCTGCCAAGCTTTTCGAAGAAGCAAGAGAGACATTGGAGCGGGAGTGTGGAACATATCATCAGGACACTCTTGGAGTGTATAGCAACCTTGCAGCAACTTATGATGCCATGGGAAGAGTTGAAGATGCCATTGAGATATTGGAATACATACTCAAGATGAGAGAAGAAAAGCTTGGAACAGCAAACCCAGATGTTGATGATGAGAAGAAAAGACTTTATGAACTTTTGAGAGAAGCTGGAAGAGTTCGGAACAAAAGGGGAAAATCACTGGAAAATCTTATAGACTCCAGCTCCCTAAAGATGaagaaggaaggaagaaagaagtgGCCCGGATTTGGCTTGAGAACATA 1736 0.4706 MPGLVAARTPSHQDQTRDECANGGERRTPSLLLKINPSLSPTSSRGFKTTLEKLAMDESSLDNPDLGPFLMKLARDTIASGESPIKALDFAIRASKSFEKVPSSGLELSMSLQVVAAIYSSLGRFGEAIHALERSIECPDVGKGSDHALAKFSGYMQLGDTYSMVGQLDRSILCYESGLKFQIEALGKSDPRVAETCRYLAEAHVQAMQFDEAENFCKMALEIHREHSSTASISEAADRRLMALICDAKGDYELALEHLVLASMSMIANEQDNEVAAIDVSIGDIYLSLCHFDEAVFAYQKALTVFKSTQGESHSSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKPVPGTTAEEIASGLTEISAIYEALNEPEEALKLLKKAVKVLGDAPGKYRTIAGIEAQMGVIFYMVGRYMEARNSFENAITKLRASGEKKSASFGVVLNQMGLACVQLYKIGEAAKLFEEARETLERECGTYHQDTLGVYSNLAATYDAMGRVEDAIEILEYILKMREEKLGTANPDVDDEKKRLYELLREAGRVRNKRGKSLENLIDSSSLKMKKEGRKKWPGFGLRT 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02064 578 Pfam Tetratricopeptide repeat 446 518 - -
Bva02g02064 578 Pfam Tetratricopeptide repeat 317 390 - -
Bva02g02064 578 SUPERFAMILY TPR-like 405 539 IPR011990 GO:0005515
Bva02g02064 578 PANTHER - 11 577 - -
Bva02g02064 578 SMART tpr_5 444 477 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 194 227 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 109 142 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 361 394 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 318 351 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 486 519 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 402 435 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 152 185 IPR019734 GO:0005515
Bva02g02064 578 SMART tpr_5 276 309 IPR019734 GO:0005515
Bva02g02064 578 SUPERFAMILY TPR-like 243 349 IPR011990 GO:0005515
Bva02g02064 578 Gene3D Tetratricopeptide repeat domain 86 261 IPR011990 GO:0005515
Bva02g02064 578 Pfam Tetratricopeptide repeat 282 305 IPR019734 GO:0005515
Bva02g02064 578 Gene3D Tetratricopeptide repeat domain 262 442 IPR011990 GO:0005515
Bva02g02064 578 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 11 577 - -
Bva02g02064 578 MobiDBLite consensus disorder prediction 1 27 - -
Bva02g02064 578 ProSiteProfiles TPR repeat profile. 276 309 IPR019734 GO:0005515
Bva02g02064 578 SUPERFAMILY TPR-like 155 516 IPR011990 GO:0005515
Bva02g02064 578 Pfam MalT-like TPR region 116 262 IPR041617 -
Bva02g02064 578 Gene3D Tetratricopeptide repeat domain 472 555 IPR011990 GO:0005515
Bva02g02064 578 ProSiteProfiles TPR repeat profile. 486 519 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02064 Bva-Chr2 21461588 21465225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02064 - - gmx:100794697 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02064 02 21461588 21465225 Bva02g02064 02 21461588 21465225 ECH