Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02052 ATGGAAGGGAAGGCGAGAATTGCTCtaatcttctccttcttcgccgtgttcttttctctctctgccGCTTTCTCTGACCCATCTCAGTTCCAAACCCAAACTCTAGTTGTAAGCTCCCTCCCTAACCCGAGCACACTCTCGTGGCCAGAAGCCGAAGCCATTTCTGGCGAATCCGACCCAGAATCTGACACCACCCTCTCTTTGCAGTTGAACCACATTGATGCTCTCTCGTTCAACAAAACCCCAGAGCAGCTCTTCAACCTTAGGCTCCAGAGGGATGTTGCAAGAGTGAAATCCCTCGCAGCAGCTGTTGGTTCTCGGAACCAGAGCCAAGCTCGCGGGAGGCCCGGGTTGGGTTTCAGCAGCTCAGTTATATCGGGCCTCGCACAGGGCAGCGGGGAGTACTTCACTCGCTTGGGTGTAGGTACGCCTCCGAGGAACGTTTACATGGTGTTAGATACTGGAAGCGACGTCGTTTGGCTCCAGTGTGCTCCCTGCCGGAAATGCTACACTCAGACCGACCCGGTTTTTGATCCGAGTAAATCTCGGTCATTCGCGGGAATCCCATGTGGGTCTCCACTTTGCCGCCGATTGGACTCTCCGGGATGCAACCAGAAGAAGGTTTGTCAGTACCAAGTTTCTTATGGTGACGGTTCGTTCACTTTCGGTGACTTCGCCACAGAAACGCTGACGTTTCGAAGAACCAAAGTGCCGCGAGTGGCTATTGGCTGTGGCCACGACAACGAAGGCCTCTTCGTCGGCGCTGCCGGTTTGCTCGGACTCGGGCGGGGGAAGTTATCATTTCCAACTCAAACCGGAATCcgattcaacaaaaaattctcGTATTGCTTAGTGGATCGGTCCGCATCCTCTAAGCCTTCGTCTGTTGTGTTTGGTGACTCGGCCGTTTCTCGAACCGCCCGGTTCACTCCTCTTCTCAAAAACCCTAAGCTCGACACTTTCTACTATGTTGAACTGCTTGGGATCAGTGTAGGTGGCGCTCCAGTCCGTGGCGTTTCGGCCTCGCTCTTCCGGCTCGACCCTGCTGGAAACGGCGGCGTGATAATCGACTCCGGTACGTCCGTGACTCGTCTGACCCGCCCGGCCTACATCGCCCTGAGAGATGCTTTCCGGGTCGGAGCGTCCCATCTGAAGCGGGCGCCTGAGTTTTCACTTTTTGATACCTGCTACGACCTGGCCGGGTTGACGGAGGTGAAGGTACCGACGTTGGTGCTACATTTCCGAGGTGCAGACGTGTCACTCCCGGCGACGAATTACTTGATCCCTGTGGATAACAGCGGCAGCTTCTGCTTCGCTTTCGCGGGAACAATGGGTGGGTTGTCGATAATCGGCAACATCCAGCAGCAAGGGTTCCGGGTCGTATACGACCTGGCAGGCATGCGGGTCGGGTTTTCCCCGCGTGGGTGCGCGTA 1433 0.538 MEGKARIALIFSFFAVFFSLSAAFSDPSQFQTQTLVVSSLPNPSTLSWPEAEAISGESDPESDTTLSLQLNHIDALSFNKTPEQLFNLRLQRDVARVKSLAAAVGSRNQSQARGRPGLGFSSSVISGLAQGSGEYFTRLGVGTPPRNVYMVLDTGSDVVWLQCAPCRKCYTQTDPVFDPSKSRSFAGIPCGSPLCRRLDSPGCNQKKVCQYQVSYGDGSFTFGDFATETLTFRRTKVPRVAIGCGHDNEGLFVGAAGLLGLGRGKLSFPTQTGIRFNKKFSYCLVDRSASSKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVELLGISVGGAPVRGVSASLFRLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRVGASHLKRAPEFSLFDTCYDLAGLTEVKVPTLVLHFRGADVSLPATNYLIPVDNSGSFCFAFAGTMGGLSIIGNIQQQGFRVVYDLAGMRVGFSPRGCA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02052 477 Gene3D Acid Proteases 105 296 IPR021109 -
Bva02g02052 477 PRINTS Pepsin (A1) aspartic protease family signature 354 365 IPR001461 GO:0004190|GO:0006508
Bva02g02052 477 PRINTS Pepsin (A1) aspartic protease family signature 141 161 IPR001461 GO:0004190|GO:0006508
Bva02g02052 477 PRINTS Pepsin (A1) aspartic protease family signature 448 463 IPR001461 GO:0004190|GO:0006508
Bva02g02052 477 Pfam Xylanase inhibitor C-terminal 322 472 IPR032799 -
Bva02g02052 477 Pfam Xylanase inhibitor N-terminal 135 300 IPR032861 -
Bva02g02052 477 Gene3D Acid Proteases 297 477 IPR021109 -
Bva02g02052 477 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 354 365 IPR001969 GO:0004190|GO:0006508
Bva02g02052 477 ProSiteProfiles Peptidase family A1 domain profile. 135 472 IPR033121 -
Bva02g02052 477 CDD cnd41_like 134 476 IPR033873 -
Bva02g02052 477 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 24 476 - -
Bva02g02052 477 SUPERFAMILY Acid proteases 128 476 IPR021109 -
Bva02g02052 477 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 150 161 IPR001969 GO:0004190|GO:0006508
Bva02g02052 477 PANTHER ASPARTYL PROTEASES 24 476 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02052 Bva-Chr2 21372456 21374418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02052 95 476 Miscellaneous Gene Families AT1G77480 28.333 1.41e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02052 K22683 - gmx:100794269 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02052 02 21372456 21374418 Bva02g02052 02 21372456 21374418 ECH