Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02042 ATGGCACCGAGAAACAGTCGCGGAAAGGCCAAGGgcgagaagaaaaagaaggaagagaaggTTCTTCCGGTTGTCTTGGATGTCACCGTAAACCTTCCCGATGAAACTCATGTTATTCTCAAGGGAATATCAACGGACAGAATTATAGATATACGAAGACTTCTATCGGTCAACACTGTGACTTGTTACATCACAAATTTTTCCTTATCACACGAGGTGAGAGGGCCACGGTTAAAGGATACGGTGGACGTCTCCGCATTGAAGCCCTGCACGCTCACTTTGGTCGAAGAGGATTACGATGAAGAGCGCGCGGTGGCCCACGTCCGACGATTGCTTGACATAGTAGCCTGCACGACGAGCTTCGGCCCGTCTCCAGCGTTGAGCAGGGACGGTGAGAAGCTTGATGCCTCGAAGACCACTCACGATAAGAGCTCCACCAGCCCCAAGACTGCCAAGCCTCAGGCCGCGGCGGCCACTGCCACTACATCGCCCAAAGAATCGGAGGCGGCGGCTTTTGATGGAGACATCGATATAAGCCATTCCTTCTCAAAGCTTGGGAGATTCTACGAGTTCTTCTCCCTTTCTCATCTTACTCCCCCTCTCCAATACATAAGGACGGTGGTAAGACGGCAAGTGGATGAGATATCGGAGGATGATTATCTATTCTCCCTTGACGTCAAGCTGTGTAATGGAAAAGTGGTTCATGTTGAGGCTTGCAGAAAGGGATTCTATAGTGTTGGAAAGCAGCGGATTTTATGCCATAATATAGTTGATTTGTTACGGCAGCTAAGTAGAGCTTTTGATAATGCTTACGATGATCTCATAAAAGCGTTCTCAGAGCGTAACAGGttTGGGAATCTCCCTTACGGCTTTAGGGCCAATACTTGGCTGGTTCCTCCTGTTGCAGCACAAGCACAATCGGCTTTCCCTCCTCTTCCAGTGGAAGATGAAAATTGGGGAGGAAATGGTGGCGGTCTAGGTAGAGATGGAAAGTTTGATTTGATTCCTTGGGCCAgtgagttttcttttattgcctCTATGCCTTGCAAGACAGCAGAAGAAAGGCAAGTTCGAGATAGAaaggcattcgtatttcacaGCCTATTCGTTGATGTTGCCATTTTCAGAGCTATTAAGGCTGTTAAGCGTGTAATGGAAGAGCCAGATTTAATCTGCTCAGTTGCAGGAAATGATATTCTTTACACTGAGACAGTAGGTGACTTGAGTATCAGAGTTCTCAAAGATGCTCCTGTTGCCAGCTGTAAGGTTGATACAAAAATTGATGGAGTTCAAGCCACTGGAGTGAGTCAAAAGGATGTAGTAGAAAGAAATCTATTAAAAGGGATTACAGCTGATGAGAACACTGCTGCCCATGATGTTACCACTTTAGGTGTTATCAATGTTAGATATTGTGGTTACATAGTTGTTGTGAAAGTCGAGGGTGGAAAgaacagaaaagtaaattcTTCATCTGATAATTTGGAGTTACTTGATCAGCCAGAAGGCGGTGCCAATGCACTCAACATTAACAGTTTGAGAATGCTGCTTCACAACCCAATACAGTCAGAGAATTATAAACAGATGACTCAAATGGAAACTTCAGAGAGAGAGGAGCTAAGTGCTTCCCATTCTTTTGTGGAGAGACTGTTGAAAGAAAGCCTTGCTAAACTTGAGAAAGAGGAACCAATTTTGGACAATTTTATAAGATGGGAACTTGGAGCCTGCTGGATACAACATTTACAAGACCAAAACAATAcagaaaatgataagaaaccTTCCGTGGAGAAAGttaagaatgaaatgaaagtCGAGGGTCTAGGGAAACCCCTTAAAGCCCTCAAGAATAACAAAAAGCAATCTTATTTGGATGATCCTAAATTATTGGAAAATTCAAGATCTCATGCGGCATGTGTTAATGGGGAAGCTGAAAGTGCTCCGTTGCCCTCATTAGAATTGCAACATGAAACTACAGTTGTAGAAAATGAACTTGTGCTGAAGGGGATGTTATCTGAAGCAGCTTTTGCCCGATTTAAAGAATCGGGAACTGGACTTCACTGCAAGTCTGTGCAAGAACTGATTAACTTGTCAAAGAAATATTACACGGATGTTGCTCTTCCAAAACTGGTGGCAGATTTTGGTTCGTTGGAACTATCTCCAGTTGATGGACGTACTCTAACTGATTTCATGCATACTAGGGGTCTACGGATGCGTTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAATTATCACATGTCCAATCACTTTGTATTCATGAGATGATAGTTCGGGCTTTTAAGCACATCCTGCAGGCCGTGATTGCTGCTGTTGCTGATAAGGAAAAAATGGCTATATCAATAGCAGGTGCCTTAAATTTGCTGCTCGGTGTTCCTCACAGCAGAGAATCAGATAAGTCGGGCAATATTGATCCCCTAGTATGGAAATGGCTGGAGGTGTTTCTGAAGAAGCGATATGATTGGGATCTTAGCAGGTCAAATTACAAAGATGTCAGGAAGTTTGCAATTTTACGTGGCTTATGTCACAAGGTGGGCATTGAGCTTGTCCCTGGGGATTTTGATATGGACTCTCCAACTCCCTTCTCCAAATCAGATATTGTTAGTTTGGTCCCAGTTCACAAGCAAGCAGCATGCTCATCGGCAGATGGAAGACAACTTTTGGAGTCGTCCAAAACAGCTCTAGACAAAGGAAAGCTTGAAGATGCTGTTACCTATGGGACAAAGGCTCTTGCCAAACTGGTAGAAGTTTGTGGTCCCTACCATCGAATGACAGCAGGAGCTTACAGCCTCCTCGCTGTAGTTTTATATCACACTGGAGACTTCAATCAGGCAAcaatttatcaacaaaaagCCCTTGATATCAATGAGAGAGAACTAGGTCTGGATCATCCAGATACAATGAAGAGTTATGGGGATCTCGCTGTTTTTTATTACAGACTTCAACACACAGAACTGGCGCTGAAGTATGTAAAGCGTGCTTTGTATCTTCTACATCTGACGTGTGGTCCTTCTCATCCAAACACTGCTGCAACGTACATTAATGTGGCAATGATGGAGGAAGGTCTGGGAAATGTGCATGTTGCCCTTAGATATCTACACAAAGCTCTTAAGTGCAACCAAAAATTACTTGGTCCAGATCATATTCAGACAGCTGCAAGTTATCACGCAATAGCCATAGCACTCTCATTGATGGAAGCATATCCTTTGAGCGTGCAGCATGAGCAAACAACTTTGCAAATTCTTCGGGCAAAGCTGGGCCCAGATGACTTGCGTACACAGGATGCTGCCGCTTGGCTTGAATATTTTGAGTCCAAGGCTTTTGAACAACAAGAAGCTGCACGAAATGGTACTCGAAAGCCTGATGCATCGATAGCTAGCAAAGGCCACTTAAGTGTATCAGATCTGCTTGACTACATTAGTCCTAATCATGATACCAAAGGGAGAGATGCATCGGtaaagagaagaaatcatATATCAAAGGCGAGGGCAAAATCCTACAAGAATATTGCCCAAGCAAGTTCTGACGAGTCTTCAAAAGAAACTGCCAAAGAGGCTTCAGATGAAGAGACATCCATACCTGAACCAGGCAGTATTGCAGATGCTGAGCAGGAGATTAATCTTGCACCTGAGGTGGAGCAGCCTGTTTCAGAAAATATCACAGAAGAAAAGTTAGAAGTTTCAGGTGAGGTTTTGTCTGAAGGACATGCTGATGCAGAGGATGGATGGCAACCCGTTCAAAGGCCAAGATCAGCTGGCTCACATGGCCGGCGACTGAAGCAGAGACGTGCAACAATTGGGAAGGTTTATAGTTACCAGAAGAAGAATGTCGAAACTGACACAGATTATCCATTGGTAAAGAGTACTAATCAGAATAGCAGGTACTACTTTTTAAAGAAGCGAACAATATCACACGTGGGTCATACAGATAATCATACTGTGAATGTCATCCAAGGCACAAAATTTGGAAGGAAGGTAGTCAAAGCTGTTACATACAGGGTCAAGTCCATGCCTTCATCTACCAAAATTGCTGCAAAGGATGCATCAGAAATCAGTGACAAGTTAGTGTGTTCTTTTTCAGAATCTGGTACAAATTCTGCACCAAATGATGTCAATCCGGTAAAGACTTCAATAGTTAGTTTAGGTAAATCTCCTTCCTACATGGAAGTAGCATTGGCACCACCAGGTACTATCTCCAAGTTGTCAGTCTATAATCCTCAAAGTGATATTCCTATTAGTCATGAACTTCGTGTTGGCAaacaagaagaggaagataTTGAAGGACACTCAGATACTAACCCAGGCCTGAAAGAGGCAAATAACCTATTTGAAGAGAGAGACAAAAATTCTTCATCGGATTCTGTAGATGATTCACCAGTGGATACCACAGCCACTGAGATGAAAGAAGAAACTGAGTTGACTGGTGATTTGGAAAATAAGACTGAGTCAGTCAAGGGGCTTGAATCTGGGGAAGTTGATGCTCATGAAGCAGTTGATACTGATAATACCAGAGTGATTGATGCGGTGGAGGATACTGTGGATTCTTACAAAGAAGAACTTGATGCAAATGGTTCACCTGACAGTTTTGATTCCCATGATAATTCCAAATCTATCTCACAAGGAGGTGAGGACTTAACAGTCAATATATCAACATCGAGTGATGGTCGGGGCCACAAGAAGTTGTCTGCATCAGCAGCTCCATTCAACCCATCACCTGCCATTGCACTTGCTGCACCAGTTGCCATGAACATAACGCTTTCTTCTGCTCCTGGTGCTGTTCCACCTATTGGCCCCTGGCCAGTAAATATGAATGTTCACCCTGGACCTCCTACAGCGTTACCCACAGTTACCCCAATATGCTCCTCTCCTCACCATCCATACCCCTCACCTCCATCAACACCAAACATGATGCAATCATTGCCATTTATTTATCCTCCCTATAGTCAACCTCAATCAGTACCAACCAGCCCTTTTCCAGTCATTAGCAGTGCCTTTCATGCGAATCATTTTACATGGCAATGTAATATGAACCCTACTGCATCTAAATTTGGCCCCAACCCTGTCTGGTGTCATCCAGTGGAATTTTCTCTTCCAACGCCTGTTGTTGAACCGATTACTGATCCCATTTTGGAACAGCAGTTGCAGTGTCATGGTTCTGATAGTCCAAGTTCAGCGGCAATTCTGTCAGAAAACATTGATAATGTCGGGGAATCTAAGAAAGAAGTGAAAGTTTTGGCATCAGAGACTTGTGAAGATGAAGTGGAAGGAGTTGGTTCAGAAGGTATAAAGGAAAATGGTAATCCAAATTTCTATGTGAATGAAAATGCGGTGAACGGGCCAAGCCATAATGTTGGTTCAGATAACACTGGCAGTagtgagaagaaaatggatGGTGAAAAAACCTTAAGCATTTTGGTTAGGGGGAGGAGAAACCGAAAGCAGACTCTAAGAATGCCTATAAGTTTGCTTACACGACCCTATGGTTCACAgtcatttaaacttttttataacCGTGTAGTTAGAGGAAGCGATGCTCCCAAGTCTATCAACTTATCTTCTAGTAAAGATTGTACAGCTCCTGCTTA 5597 0.4218 MAPRNSRGKAKGEKKKKEEKVLPVVLDVTVNLPDETHVILKGISTDRIIDIRRLLSVNTVTCYITNFSLSHEVRGPRLKDTVDVSALKPCTLTLVEEDYDEERAVAHVRRLLDIVACTTSFGPSPALSRDGEKLDASKTTHDKSSTSPKTAKPQAAAATATTSPKESEAAAFDGDIDISHSFSKLGRFYEFFSLSHLTPPLQYIRTVVRRQVDEISEDDYLFSLDVKLCNGKVVHVEACRKGFYSVGKQRILCHNIVDLLRQLSRAFDNAYDDLIKAFSERNRFGNLPYGFRANTWLVPPVAAQAQSAFPPLPVEDENWGGNGGGLGRDGKFDLIPWASEFSFIASMPCKTAEERQVRDRKAFVFHSLFVDVAIFRAIKAVKRVMEEPDLICSVAGNDILYTETVGDLSIRVLKDAPVASCKVDTKIDGVQATGVSQKDVVERNLLKGITADENTAAHDVTTLGVINVRYCGYIVVVKVEGGKNRKVNSSSDNLELLDQPEGGANALNINSLRMLLHNPIQSENYKQMTQMETSEREELSASHSFVERLLKESLAKLEKEEPILDNFIRWELGACWIQHLQDQNNTENDKKPSVEKVKNEMKVEGLGKPLKALKNNKKQSYLDDPKLLENSRSHAACVNGEAESAPLPSLELQHETTVVENELVLKGMLSEAAFARFKESGTGLHCKSVQELINLSKKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVIAAVADKEKMAISIAGALNLLLGVPHSRESDKSGNIDPLVWKWLEVFLKKRYDWDLSRSNYKDVRKFAILRGLCHKVGIELVPGDFDMDSPTPFSKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVEVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYISPNHDTKGRDASVKRRNHISKARAKSYKNIAQASSDESSKETAKEASDEETSIPEPGSIADAEQEINLAPEVEQPVSENITEEKLEVSGEVLSEGHADAEDGWQPVQRPRSAGSHGRRLKQRRATIGKVYSYQKKNVETDTDYPLVKSTNQNSRYYFLKKRTISHVGHTDNHTVNVIQGTKFGRKVVKAVTYRVKSMPSSTKIAAKDASEISDKLVCSFSESGTNSAPNDVNPVKTSIVSLGKSPSYMEVALAPPGTISKLSVYNPQSDIPISHELRVGKQEEEDIEGHSDTNPGLKEANNLFEERDKNSSSDSVDDSPVDTTATEMKEETELTGDLENKTESVKGLESGEVDAHEAVDTDNTRVIDAVEDTVDSYKEELDANGSPDSFDSHDNSKSISQGGEDLTVNISTSSDGRGHKKLSASAAPFNPSPAIALAAPVAMNITLSSAPGAVPPIGPWPVNMNVHPGPPTALPTVTPICSSPHHPYPSPPSTPNMMQSLPFIYPPYSQPQSVPTSPFPVISSAFHANHFTWQCNMNPTASKFGPNPVWCHPVEFSLPTPVVEPITDPILEQQLQCHGSDSPSSAAILSENIDNVGESKKEVKVLASETCEDEVEGVGSEGIKENGNPNFYVNENAVNGPSHNVGSDNTGSSEKKMDGEKTLSILVRGRRNRKQTLRMPISLLTRPYGSQSFKLFYNRVVRGSDAPKSINLSSSKDCTAPA 1865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1523 1568 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1444 1458 - -
Bva02g02042 1865 ProSiteProfiles TPR repeat profile. 930 963 IPR019734 GO:0005515
Bva02g02042 1865 SUPERFAMILY TPR-like 895 1084 IPR011990 GO:0005515
Bva02g02042 1865 Gene3D Tetratricopeptide repeat domain 889 1003 IPR011990 GO:0005515
Bva02g02042 1865 Gene3D Tetratricopeptide repeat domain 1004 1193 IPR011990 GO:0005515
Bva02g02042 1865 Pfam Mitochondrial function, CLU-N-term 45 115 IPR028275 -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 143 166 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1466 1510 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1240 1265 - -
Bva02g02042 1865 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1847 IPR027523 GO:0006996
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1531 1562 - -
Bva02g02042 1865 Pfam Tetratricopeptide repeat 929 999 - -
Bva02g02042 1865 Pfam Tetratricopeptide repeat 1013 1087 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1780 1795 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 126 166 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1165 1203 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1417 1510 - -
Bva02g02042 1865 SMART tpr_5 1014 1047 IPR019734 GO:0005515
Bva02g02042 1865 SMART tpr_5 972 1005 IPR019734 GO:0005515
Bva02g02042 1865 SMART tpr_5 930 963 IPR019734 GO:0005515
Bva02g02042 1865 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1847 - -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1419 1436 - -
Bva02g02042 1865 SUPERFAMILY Hypothetical protein c14orf129, hspc210 218 276 IPR023231 -
Bva02g02042 1865 CDD CLU-central 719 860 IPR033646 -
Bva02g02042 1865 ProSiteProfiles Clueless (Clu) domain profile. 315 591 IPR025697 -
Bva02g02042 1865 Pfam Translation initiation factor eIF3 subunit 135 717 855 IPR033646 -
Bva02g02042 1865 MobiDBLite consensus disorder prediction 1780 1801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02042 Bva-Chr2 21319462 21332952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02042 K03255 - gmx:100784117 2664.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02042 02 21319462 21332952 Bva02g02042 02 21319462 21332952 ECH