Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02016 ATGTCGAGAGTTAAGCACAAACCAGTTGCTAGCAAAAGCAGCGGTAAGAGAGTGTTGAGATCAGCACCACCAGTAACGCCATCTCGTACTGGTGGAGGCAATGAAGCAGAGGAACCACAAAccgcAGGTACGCAGGGGCAGAGGAAAAAGTGGCGTTTTAGACCAGGAACAAAGGCTCTTCGCGAGATTCGTTATTTCCAGAAGACTTTTAAGTTACTTATTCCAGCTGCCCCCTTTATAAGATGTGTCAAGCAGATTACATTTCAATTATCCAGGGAGGTCAGTCGCTGGTCAGCTGAAGCCCTAGTAGCACTACAGGAGGCAGCAGAGGATTATATGgttcttttatttgaagatGCAATGCTGTGTGCTATTCATGCAAAGCGTGTCACTCTTATGAAAAGGGATTTTGAGTTGGCTCGTAGGCTTGGAGGAAAGGGAAGACCTTGGTG 452 0.4491 MSRVKHKPVASKSSGKRVLRSAPPVTPSRTGGGNEAEEPQTAGTQGQRKKWRFRPGTKALREIRYFQKTFKLLIPAAPFIRCVKQITFQLSREVSRWSAEALVALQEAAEDYMVLLFEDAMLCAIHAKRVTLMKRDFELARRLGGKGRPW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02016 150 PRINTS Histone H3 signature 110 126 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 PRINTS Histone H3 signature 92 110 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 PRINTS Histone H3 signature 5 19 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 PRINTS Histone H3 signature 126 147 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 MobiDBLite consensus disorder prediction 33 47 - -
Bva02g02016 150 SUPERFAMILY Histone-fold 21 144 IPR009072 GO:0046982
Bva02g02016 150 MobiDBLite consensus disorder prediction 1 53 - -
Bva02g02016 150 PANTHER HISTONE H3 11 150 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 Pfam Core histone H2A/H2B/H3/H4 31 143 IPR007125 GO:0003677
Bva02g02016 150 SMART h35 45 148 IPR000164 GO:0000786|GO:0003677|GO:0030527
Bva02g02016 150 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 11 150 - -
Bva02g02016 150 Gene3D Histone, subunit A 4 147 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02016 Bva-Chr2 21175817 21178949 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02016 K11253 - jre:108996428 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02016 02 21175817 21178949 Bva02g02016 02 21175817 21178949 ECH