Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02007 ATGGCTTCTGAGGATGTGAAAACCAGCGAATCTCCAGTAACTAAGATCGTCAATCTGGCGGAGGAGGCGAAGCTCGCGAGAGAAGGCGTTAGGGCTCCTAGTGATGCTATTCTCAGCGTCTGCAAGTCCCTCGTTGCCGGTGGAGTCGCTGGAGGAGTGTCAAGGACGGCTGTTGCTCCTCTTGAACGGTTGAAAATTTTGCTACAGGTCCAGAATCCtcataacataaaatacaaTGGAACCATTCAAggtctaaaatatatttggagAACTGAAGGGATTCGTGGAATGTTCAAAGGGAATGGTACAAATTGTGCTCGGATTGTCCCTAATTCTGCAGTGAAGTTCTTCAGCTATGAACAAGCTTCTCAAGGCATACTGTATATGTATAAGAAGCAGACTGGAAATGAGGATGCTGAGCTGACTCCTGTTTTACGTCTTGGAGCTGGAGCATGTGCAGGAATAATTGCCATGTCTGCCACTTATCCAATGGACATGGTTAGAGGCAGGATAACTGTACAGACAGAGACGTCTCCTTACCAGTACAGGGGAATGTTCCATGCTTTATTAACTGTTATCAGGGAAGAAGGGGCACGTTCTGTGTACAAGGGATGGCTTCCTTCAGTAATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTGTACGAGTCTCTAAAGGACTGGTTAGTTAAATCTAAGTCATTTGGTATATGTCAAGATTCTGATTTGAGCGTGACAACAAGGCTAGCATGTGGTGCTGTTGCTGGAACTGTCGGACAGACTGTTGCTTATCCTTTTGATGTAATTCGTCGAAGAATGCAGATGGTGGGTTGGAGTCATGCTGCTTCTGTTGTAACTGGTGATGGAAGAGTCAGGGCCCCACTTGAGTACACTGGCATGGTTGATGCATTTAGGAAGACTGTGCGGCATGAGGGATTTGGAGCCTTATACAAGGGTCTGGTGCCAAATTATGTAAAGGTAGTCCCATCCATAGCACTTGCGTTTGTTTCATATGAAGTGGTGAAGGACATTTTAGGAGTCGATTTCCGAATACCAGATTA 1064 0.4445 MASEDVKTSESPVTKIVNLAEEAKLAREGVRAPSDAILSVCKSLVAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGIRGMFKGNGTNCARIVPNSAVKFFSYEQASQGILYMYKKQTGNEDAELTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTETSPYQYRGMFHALLTVIREEGARSVYKGWLPSVIGVIPYVGLNFAVYESLKDWLVKSKSFGICQDSDLSVTTRLACGAVAGTVGQTVAYPFDVIRRRMQMVGWSHAASVVTGDGRVRAPLEYTGMVDAFRKTVRHEGFGALYKGLVPNYVKVVPSIALAFVSYEVVKDILGVDFRIPD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02007 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Bva02g02007 354 PANTHER BNAA09G39370D PROTEIN 1 349 - -
Bva02g02007 354 SUPERFAMILY Mitochondrial carrier 38 341 IPR023395 -
Bva02g02007 354 Pfam Mitochondrial carrier protein 243 346 IPR018108 -
Bva02g02007 354 Pfam Mitochondrial carrier protein 39 124 IPR018108 -
Bva02g02007 354 Pfam Mitochondrial carrier protein 141 233 IPR018108 -
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Bva02g02007 354 PRINTS Mitochondrial carrier protein signature 156 174 IPR002067 GO:0055085
Bva02g02007 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 229 IPR018108 -
Bva02g02007 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 345 IPR018108 -
Bva02g02007 354 Gene3D Mitochondrial carrier domain 35 347 IPR023395 -
Bva02g02007 354 PANTHER SOLUTE CARRIER FAMILY 25 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02007 Bva-Chr2 21112547 21116635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02007 44 349 EF-hand Containing Proteins AT5G51050 37.785 1.16e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02007 K14684 - tcc:18614017 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02007 02 21112547 21116635 Bva02g02007 02 21112547 21116635 ECH