Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01982 ATGAAGGAAAATTATAAGGAATTCTCTGAATCTGCGCACGCCCATTTGCCCAGTGAGAGTGGAGGAGCCTTAGCCCGAGGATCTTCCCTACTAGCATTGAGGCAGTATATACACAGGTCTCGTTTGGATTCTATCATGGCGGGAGGAGAGACTTCATGGATAAGCGACTACTTTGATGACACAGCAAAAGAGACTCGGGAGTTTGATTCATTCTCAGAAGTTGGAGATGAAGATGATAAAGATGCTAATGCTGTTTCTGTGGATCAAATTTTGCCTGATGATTTGTTGGAAAGAATCCTAGCCTATCTCCCCATTGCAAGCATTTTCAGAGCTGGTTGTGTGTGTAAAAGATGGCATGAGATTGTTACATCAGAAAGGTTTTTGTGGAACCTTTCATACGTGCTGCCACAGAAACCTTGGTACTTTATGTTTACAAGCTCTGATGAACCGATTGGCTATGCTTATGATCCTATCCTTCGGAAATGGTACAGCATTGAACTTCCCTGCATTGAGAATTCTAATTGGTTCATCACTTCATCATGCGGCTTGGTTTGTTTCATTGACAATGACAGTAGAAGTCAATTATGTGTCTGCAATCCTATTACTAGAATCTTCAGGAAGCTTGAGGAGCCCCCAGGTTTGAAATATTCTGATTACGGTGCATTAGCAATGTCAGTGAACAGGGTATCCCACATCTATTCCGTGgcaattataaaatcaaagcaAGTTCCAGGAAACTTCTTTTCGTGGGATATCTCAATTCATGTATACAATTCAGAAAAAATGACCTGGGTGACCACTTTGACGGAGGTTATGACAGGCTGGAGGGGTGGTGATGAAAGTGTCATATGCAATGGGGTACTGTACTTTTTGGTTTACTCAACTGGGGTTGGTCAAGCAGAACATCGTCACAACCTGATTGCATATAATATCTCCACCCTTTCTCATTGTTCCTTGTCAAATAGCTTCATACCAGTACCTTGCCCTCTAACATGTGGACGTCTGATGAATCTGAAGGAGAAGCTTGTGATGGTGGGAGGAATTGGTAAACCAGATCGACCTGACATAATAAAAGGCATTGGTATCTGGGTTCTAAATGATAGAAAGTGGGATGAAATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTCGATGATGTTTTTGCTAGCAGTGGCACagatgatataatatatattcaaagcTATGGAGCTCCAGCACTTCTGACATTTGACATGAACCTTAAACAATGGAAATGGTCACAAAAGTGCCCTGTGACAAAAAAGTTTCCGCTGCAGCTCTTCACTGGTTTTTGCTTTGAGCCCAGGCTTGAAATTGCTCCTTA 1352 0.4135 MKENYKEFSESAHAHLPSESGGALARGSSLLALRQYIHRSRLDSIMAGGETSWISDYFDDTAKETREFDSFSEVGDEDDKDANAVSVDQILPDDLLERILAYLPIASIFRAGCVCKRWHEIVTSERFLWNLSYVLPQKPWYFMFTSSDEPIGYAYDPILRKWYSIELPCIENSNWFITSSCGLVCFIDNDSRSQLCVCNPITRIFRKLEEPPGLKYSDYGALAMSVNRVSHIYSVAIIKSKQVPGNFFSWDISIHVYNSEKMTWVTTLTEVMTGWRGGDESVICNGVLYFLVYSTGVGQAEHRHNLIAYNISTLSHCSLSNSFIPVPCPLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWVLNDRKWDEIARMPHKFFQGFGEFDDVFASSGTDDIIYIQSYGAPALLTFDMNLKQWKWSQKCPVTKKFPLQLFTGFCFEPRLEIAP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01982 450 Gene3D - 80 131 - -
Bva02g01982 450 PANTHER BNAA09G39300D PROTEIN 38 450 - -
Bva02g01982 450 SMART fbox_2 91 131 IPR001810 GO:0005515
Bva02g01982 450 SUPERFAMILY F-box domain 90 189 IPR036047 GO:0005515
Bva02g01982 450 SUPERFAMILY Galactose oxidase, central domain 144 427 IPR011043 -
Bva02g01982 450 MobiDBLite consensus disorder prediction 1 21 - -
Bva02g01982 450 TIGRFAM F_box_assoc_1: F-box protein interaction domain 181 380 IPR017451 -
Bva02g01982 450 ProSiteProfiles F-box domain profile. 91 131 IPR001810 GO:0005515
Bva02g01982 450 PANTHER F-BOX FAMILY PROTEIN 38 450 IPR045048 -
Bva02g01982 450 Gene3D - 136 434 IPR015915 GO:0005515
Bva02g01982 450 Pfam F-box-like 91 130 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01982 Bva-Chr2 21002340 21005182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01982 - - csin:114260747 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01982 02 21002340 21005182 Bva02g01982 02 21002340 21005182 ECH