Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01954 ATGTCTTTGTTCGTTGCTCTTTCCAGAGCCACCTCTACTCTGGCCaagtcttctttctctctttcccgGCGCATTCAATGCATGAGCAATGTCCCCGAAAATACAGTATATTCAGGACCCATTAGCCATAGCCCCAACCAAAGAGTGACCCTGACCCACTTGAGACAAAAACACAGAAAGGGCGAACCTATTACCATGGTCACTGCCTACGATTACCCATCAGCGGTGCACCTAGACATGGCCGGCATTGATATCTGCCTTGTTGGGGACTCGGCGGCCATGGTGGTTCATGGGCATGACACCACGCTGCCTATTACGCTCGAAGAAATGCTTGTTCATTGTCGCGCCACGGCTCGAGGGGCTAAGCGGCCCCTTCTTGTCGGGGACTTGCCCTTTGGGACTTATGAATCGAGTACTGGTCAGGCAGTTGATACAGCAGTTCGAATTCTAAAGGAAGGAGGAATGGATGCTGTAAAATTGGAAGGAGGGGCACCTTCAAGAATTACTGCGGCAAAAGCTATTGTTGAAGCTGGAATTGCAGTCATGGGGCACGTAGGACTTACTCCCCAGGCCATTAGTGTTTTAGGGGGTTTTAAACCTCAGGGGAAAAATGTTGCTAGTGCTGTCAAGGTAGTAGAGACAGCATTGGCTTTGCAGGAAGCTGGCTGCTTTTCTGTTGTTCTAGAATGTGTGCCCCCACCTGTGGCTGCTGCAGCGACAGCTGCTCTTCAAATTCCTACAATTGGAATAGGAGCTGGCCCCTTTTGCAGTGGACAGGTGCTAGTTTACCATGATCTGCTTGGTATGCTGCAACACCCCCATCATGCCAAGGTCACTCCAAAATTCTGTAAGCAATATGCCCAAGCTGGAGAGGTCATCCATACGGCCCTGGTAGAGTATAGAGAAGAAGTGAGAAATGGTTCATTCCCTGGTCCTCTCCACAGCCCATATAAAATCAGTGAAAGTGATGCTAATGATTTCTCCATTGAGTTGCAAAGCTTGGGTTTGGACAGGGCAGCATCTGCAGTATATGAAGCAGTTCAGAAGATGGATACATCCAAATCAGTTGGTGAAGGAAACCCAACCAGTCAATG 1094 0.4817 MSLFVALSRATSTLAKSSFSLSRRIQCMSNVPENTVYSGPISHSPNQRVTLTHLRQKHRKGEPITMVTAYDYPSAVHLDMAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRATARGAKRPLLVGDLPFGTYESSTGQAVDTAVRILKEGGMDAVKLEGGAPSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFKPQGKNVASAVKVVETALALQEAGCFSVVLECVPPPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYAQAGEVIHTALVEYREEVRNGSFPGPLHSPYKISESDANDFSIELQSLGLDRAASAVYEAVQKMDTSKSVGEGNPTSQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01954 364 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 25 356 - -
Bva02g01954 364 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 48 314 IPR015813 GO:0003824
Bva02g01954 364 Gene3D - 46 328 IPR040442 -
Bva02g01954 364 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 25 356 IPR003700 GO:0003864|GO:0015940
Bva02g01954 364 Pfam Ketopantoate hydroxymethyltransferase 48 311 IPR003700 GO:0003864|GO:0015940
Bva02g01954 364 CDD KPHMT-like 51 310 IPR003700 GO:0003864|GO:0015940
Bva02g01954 364 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 49 316 IPR003700 GO:0003864|GO:0015940
Bva02g01954 364 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 49 315 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01954 Bva-Chr2 20829456 20832546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01954 K00606 - jre:108998105 564.303