Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01919 ATGGACTTGATGAAACTGATGATGAGTGACTACAGGGTAGAGATGATTAATGATGGAATGCAAGAGTTCTATGTGCATTTCCATGGACCCAATGAAAGTCCTTATCATGGAGGTGTGTGGAAAATAAGAGTTGAGCTACCAGATGCTTATCCTTACAAGTCACCTTCCATAGGCTTTGTCAATAAGATCTATCACCCGAATGTTGATGAGATgtCAGGTTCAGTTTGTCTAGATGTTATCAATCAGACCTGGAGCCCCATGTTTGATCTTGTTAATGTATTTGAGGTGTTTCTACCACAACTTCTTCTGTATCCCAATCCATCCGACCCTTTGAATGGAGAAGCCGCAGCTCTAATGATGCGTGACCGAACTTCTTATGAACATAGGGTTAAAGAATACTGTGAGAAGTATGCCAAGGCAGAAGACATAGGAGCTGCAACAGAAGAGAAATCAAGTGATGAAGAGCTGAGCGAAGATGAATATGATTCTAGTGATGAACAGGTGGCTGGAAAAGCAGACCCCTA 524 0.4179 MDLMKLMMSDYRVEMINDGMQEFYVHFHGPNESPYHGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTSYEHRVKEYCEKYAKAEDIGAATEEKSSDEELSEDEYDSSDEQVAGKADP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01919 174 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 1 174 - -
Bva02g01919 174 SMART ubc_7 1 139 - -
Bva02g01919 174 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 139 IPR000608 -
Bva02g01919 174 Gene3D Ubiquitin Conjugating Enzyme 1 152 IPR016135 -
Bva02g01919 174 MobiDBLite consensus disorder prediction 142 174 - -
Bva02g01919 174 Pfam Ubiquitin-conjugating enzyme 3 133 IPR000608 -
Bva02g01919 174 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 64 80 IPR023313 -
Bva02g01919 174 CDD UBCc 1 134 IPR000608 -
Bva02g01919 174 PANTHER UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKE 1 174 - -
Bva02g01919 174 SUPERFAMILY UBC-like 3 139 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01919 Bva-Chr2 20673649 20676381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01919 17 168 Miscellaneous Gene Families AT1G17280 23.669 7.96e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01919 K10576 - gmx:548025 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01919 02 20673649 20676381 Bva02g01919 02 20673649 20676381 ECH