Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01890 ATGTCACTTCTCTGTGGGCTTCCTGTACTTGAGTGTGTTTATTGTCTGGGTTGTGCTCGTTGGCTTTGGAAGAAATGTCTGTACACTGCTGGCTACGAGAGTGAAAACTGGGGCCTAGCTACTGCAGAAGAATTTGAGCCTGTGCCTCGAATGTGTCGTCTAATCTTAGCTGTCTACGAAGATGATATTCGTAACCCCCAATGGGCTCCCCCTGGAGGTTATGGTCTTAATCCTGACTGGGTTGTCTTGCGTAAGGACTATGCCGACAACGAAGGTCGTGTTACTCCCTACATGATATACCTTGATCATGACCATGCCGAAATTATGCTGGCTGTTACGGGACTCAATTTAGCAAAGGAAAGTGATTATGCAGTTTTACTTGATAACAAACTTGGGCAGACAGAATTTCATGGTGGCTATGTCCACAATGGGTTATTGAAGGCAGCAGAATGGGTTTTTCAAGCTGAGCATGAGGTTCTCAGGGAGCTGGTAGCAGAAAATCCAAGTTATGTGCTGACATTTACGGGCCACTCCCTCGGGGCTGGGGTGGTGGCATTATTGACAATGCTGGTGCTTCATAATCTTGATAAATTGAGCATACAGAGAAATAGGATAAAGTGTTACGCCCTAGCTCCTCCCCGGTGTGTGTCTCTCAATTTGGCTGTAAGATATGCAGATGTTATCAATTCTGTTGTACTCCAGGATGATTTTTTACCCCGGACAACCACTGCTTTAGAAGATGTCTTCAAGTCACTTTTCtgTTTGCCCTGTTTATTGTGCCTAATGTGCTTGAAGGATACTTGCACACTCGAGGAGAAGATGCTTAGAGATCCCAGGCGCCTATATGCACCTGGTCGTCTGTATCACATCGTGGAGCGAAGGCCTTTCAGGATAGGAAGATTTCCGCCTGTTGTAAGGACTGCAGTACCTGTTGATGGGAGATTTGAGCATATAGTTCTTTCTTGCAATGCAACGGCTGACCATGCAATCATTTGGATAGAGAGAGAAGCCCAAAGGGCCATTGATTTAATGTTAGAGAAAGATAGGATTATGGAGATTCCGGCAAAGCAGAAAATGGAGCGGCAGGAGTCTCTAGATCGAGAACACAACGAGGAGTACCGGGCAGCACTTCAGAGGGCAGTTGCTTTGAATGTTCCTCAAGCGTACTCACCTTCCTCGTATGGAACATTTCATCAAATGGATGCAGGGGAGGATTCTGGAAGATCAAGTAGTCAAGGCTCTTCCTTGTCTCTTAAGAAACGAACAGACAGTTGGAATGAATTTGTAGGGCGTCTTTTTGATGTAGACGACTCAGGTCATATGGTATTCAAGAAgagatatcaata 1346 0.451 MSLLCGLPVLECVYCLGCARWLWKKCLYTAGYESENWGLATAEEFEPVPRMCRLILAVYEDDIRNPQWAPPGGYGLNPDWVVLRKDYADNEGRVTPYMIYLDHDHAEIMLAVTGLNLAKESDYAVLLDNKLGQTEFHGGYVHNGLLKAAEWVFQAEHEVLRELVAENPSYVLTFTGHSLGAGVVALLTMLVLHNLDKLSIQRNRIKCYALAPPRCVSLNLAVRYADVINSVVLQDDFLPRTTTALEDVFKSLFCLPCLLCLMCLKDTCTLEEKMLRDPRRLYAPGRLYHIVERRPFRIGRFPPVVRTAVPVDGRFEHIVLSCNATADHAIIWIEREAQRAIDLMLEKDRIMEIPAKQKMERQESLDREHNEEYRAALQRAVALNVPQAYSPSSYGTFHQMDAGEDSGRSSSQGSSLSLKKRTDSWNEFVGRLFDVDDSGHMVFKKRYQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01890 448 CDD Lipase_3 44 240 - -
Bva02g01890 448 SUPERFAMILY alpha/beta-Hydrolases 43 243 IPR029058 -
Bva02g01890 448 MobiDBLite consensus disorder prediction 394 416 - -
Bva02g01890 448 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Bva02g01890 448 Gene3D alpha/beta hydrolase 38 251 IPR029058 -
Bva02g01890 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Bva02g01890 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Bva02g01890 448 Pfam Lipase (class 3) 120 243 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01890 Bva-Chr2 20498565 20501888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01890 1 446 Miscellaneous Gene Families AT4G00500 68.444 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01890 - - gmx:100800227 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01890 02 20498565 20501888 Bva02g01890 02 20498565 20501888 ECH