Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01889 ATGGACAAGGACGAAGTAATTGAGTTTCTGGGTTGCGTTCCTCTGTTGCAGAAGCTTCCCAGCTCTTCTCTGAGAAGAATTGCTGAACTTGTGTTTGTCAAACACTACGAGCGAGGAGATTATGTCGTTCATGAGGATGAACCTGCGGATGGAATTTACTTCATATGGGAAGGAGAGGCTGAGGTTGTTGGATCCGTTGATGTCAATGATGAAAACCGTCCAGAATTCCAATTGAAAAGATATGACTATTTTGGTTATGGTTTGTCAAATGCAGTTCATCATGCAGATGTTGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTACCTCACGAGCACTCAACTCTGCTGCATCCAAAGTCTATCTGGAGTGCAGAAAAGAGTCCTGAGACATGCTCATCCATTGAGCAAATATTGCATTTGGAACCCATAGAGGTAGATCTTTTCCAAGGAATCACCCCATCAGATGCTCCCAAATTTGGGAAGGTGTTTGGGGGACAGTTCATTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTCAAGCTTGTTCATAGTTTGCatgcttattttcttcttgtgggGGATTTTAACATGCCAATTATATATCGAGTTGACCGTCTCCGTGATGGAAAGAGCTTTGCTACGAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGCTGGCTTCATTCCaaAAAGAAGAATTAGGATTTGACCATCAGGATGTGGCCATGCCATCCGCTCCCTCTCCAGACACGCTTCTGTCAATGGAAGAACTACGGGAAAGACGCCTTACAGATCCTCGTCTTCCAAGAACTTACCGAAACAAGGTAGCTGCAGCGGAATTCATTCCTTGGCCTATAGAGATACGGTTCTGTGAGCCTAATACTTCAACGAATCAGACCAAATCTCCTGCTAGTTTGAGATACTGGTTTAGAGCTAAAGGAAGACTCTCCGATGATCAGGCCCTGCATAGGTGTGTGATGGCATATACTTCTGATCTAATCTTTCTTCAAGTCAGCATGAATCCCCACCGCGCCAGGGGTTTGACGACACGGTGTGTGAGTCTAGACCATGCAATGTGGTTCCACCGGCCTTTCAGAGCTGATGAGTGGGTGCTATTTGTGATCCACAGCCCTTCTGCCTATAATGCACGTGGTTCTGTCACAGCCCATATGTTCAATCAGAAAGGAGAGCTTCTTGCATCAGTGGTTCAAGAAGGTCTAATTAGGAAGACAAGAAGGGAAAATTCAGCCGTCAAATCAAAGTTATG 1289 0.4414 MDKDEVIEFLGCVPLLQKLPSSSLRRIAELVFVKHYERGDYVVHEDEPADGIYFIWEGEAEVVGSVDVNDENRPEFQLKRYDYFGYGLSNAVHHADVVALSKLTCLVLPHEHSTLLHPKSIWSAEKSPETCSSIEQILHLEPIEVDLFQGITPSDAPKFGKVFGGQFIGQALAAASKSVDCLKLVHSLHAYFLLVGDFNMPIIYRVDRLRDGKSFATRKVDAIQKGNVIFTLLASFQKEELGFDHQDVAMPSAPSPDTLLSMEELRERRLTDPRLPRTYRNKVAAAEFIPWPIEIRFCEPNTSTNQTKSPASLRYWFRAKGRLSDDQALHRCVMAYTSDLIFLQVSMNPHRARGLTTRCVSLDHAMWFHRPFRADEWVLFVIHSPSAYNARGSVTAHMFNQKGELLASVVQEGLIRKTRRENSAVKSKL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01889 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Bva02g01889 429 CDD Thioesterase_II_repeat1 313 415 - -
Bva02g01889 429 PANTHER ACYL-COA THIOESTERASE 51 429 IPR003703 GO:0006637|GO:0047617
Bva02g01889 429 Pfam Thioesterase-like superfamily 161 415 - -
Bva02g01889 429 Gene3D Jelly Rolls 2 123 IPR014710 -
Bva02g01889 429 PANTHER ACYL-COA THIOESTERASE 51 429 - -
Bva02g01889 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 130 240 IPR029069 -
Bva02g01889 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Bva02g01889 429 Gene3D - 128 420 IPR042171 -
Bva02g01889 429 SMART cnmp_10 15 132 IPR000595 -
Bva02g01889 429 CDD CAP_ED 15 112 IPR000595 -
Bva02g01889 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Bva02g01889 429 CDD Thioesterase_II_repeat2 146 238 - -
Bva02g01889 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 417 IPR029069 -
Bva02g01889 429 SUPERFAMILY cAMP-binding domain-like 4 112 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01889 Bva-Chr2 20490207 20495849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01889 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 65.268 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01889 K01068 - gmx:100805018 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01889 02 20490207 20495849 Bva02g01889 02 20490207 20495849 ECH