Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01887 ATGAAACGTGTGGATGATGAAACAGACTCTTCACACAATGGCAGTGAAATAGAAGTGACTAATAATCCACTCATTTGTGGGCTTCCAGATGATATTTCGCTTTCTTGCTTGGCAAGAGTTCCTCGAAAATATCATTCAGTTCTTAAGTGTGTTTCAAAGAGATGGAGAGACTTAGTTTGCAGCGAAGAGTGGTATTCTTATCGCCAAAAACATAAACTTCATGAGACATGGATCTATGCTTTATGCAGGGATAAGTTTGACCAGATTCACTGTTATGTCTTGGATCCAACCCCATTAAGAAGATGCTGGAAACCTATTCAAGCGATTCCATCTCGGAGCCTGAGGAGGAAGGGCATGGCTTTTGAAGTTTTGGGGAAGAAAGTTTTCTTGTTGGGTGGTTGTGGCTGGTCTGAAGATGCTACCAATGAGGTCTTCTCTTATGATGCATCCATGAACTCTTGGGTTGAAGCTACTCCCCTATCAACTGCAAGGAGCTACTTTGCTTGTGAAGTTTTGGatggaaaaatatatgctaTTGGTGGATTAGGTTCAAATTCAAGTGATCCTCATTCTTGGGACACTTATGACCCTCAGATAAATAGTTGGATATCTCACAGCGATCCTAACATTGTTCCTGAAATTGAAGATTCAGTTGTTATGGATGGAAAGATATACATTCGATGCGGTGCATCTTCTGTAACTTCCCATGTGTATTCTGTTGTGTATGAACCGTCAAGTGGTACATGGCAGCATGCAGATCCTGATATGGTTTCAGGATGGCGAGGTCCTGCGGTTGTTGTTGATGGGATCCTTTATGTGTTGGACCAAAGCTTAGGAACTAGGTTGATGATGTGGCAAAAGGATAGACGTCGGTGGGTGCCTGTGGGAAAACTGTCACCAAAGCTCACAAGACCACCTTGCCGGCTTGTTGCTATTGGGAAAAGCATTTTTGTTGTTGGGAAGGGACTTAGCACTGTTGTTATTGATGTTGGTGATGTCGGGAATATGGGAAGGATTATGGTGGGTTCTTCTATACCCAAATTGATTTCTGATGATGATGTAATTAGCTGTAAATGCTCATCAATCTG 1088 0.4182 MKRVDDETDSSHNGSEIEVTNNPLICGLPDDISLSCLARVPRKYHSVLKCVSKRWRDLVCSEEWYSYRQKHKLHETWIYALCRDKFDQIHCYVLDPTPLRRCWKPIQAIPSRSLRRKGMAFEVLGKKVFLLGGCGWSEDATNEVFSYDASMNSWVEATPLSTARSYFACEVLDGKIYAIGGLGSNSSDPHSWDTYDPQINSWISHSDPNIVPEIEDSVVMDGKIYIRCGASSVTSHVYSVVYEPSSGTWQHADPDMVSGWRGPAVVVDGILYVLDQSLGTRLMMWQKDRRRWVPVGKLSPKLTRPPCRLVAIGKSIFVVGKGLSTVVIDVGDVGNMGRIMVGSSIPKLISDDDVISCKCSSI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01887 362 SMART kelc_smart 175 222 IPR006652 GO:0005515
Bva02g01887 362 SMART kelc_smart 127 174 IPR006652 GO:0005515
Bva02g01887 362 SUPERFAMILY F-box domain 23 78 IPR036047 GO:0005515
Bva02g01887 362 Gene3D - 66 334 IPR015915 GO:0005515
Bva02g01887 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 16 346 - -
Bva02g01887 362 Pfam F-box domain 26 62 IPR001810 GO:0005515
Bva02g01887 362 Pfam Kelch motif 115 161 IPR006652 GO:0005515
Bva02g01887 362 Pfam Kelch motif 163 202 IPR006652 GO:0005515
Bva02g01887 362 SUPERFAMILY Kelch motif 77 323 IPR015915 GO:0005515
Bva02g01887 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 16 346 - -
Bva02g01887 362 SMART fbox_2 28 68 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01887 Bva-Chr2 20484607 20487625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01887 28 272 Miscellaneous Gene Families AT4G33900 26.217 1.21e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01887 - - qsu:112035561 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01887 02 20484607 20487625 Bva02g01887 02 20484607 20487625 ECH