Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01886 ATGAATTGCACTTCCAGATCCAAAAATCAACCAAAGTTTGCAAGCTTTCAAGGAAATGCAGACCATTCTTGGGCAGTCCAAATCGAAGTCATGAAAATTTACGGCCTAGGCTGTCTGCATTTCTTCTCTCACCTCTTTTCAGATTGCATTCTCCATCCACCGAGAGTCTTGCCGTACGCTGCTCCTCAAATGTTAATGTCTTCGTTGCCAGCGCAGAACCACGCCAAGCTTGGGTTTAAACTGAAATTGACTTCTGGGTTTTCTGAATCACTAGTGCGGGTTCCCATAATGCCTTTGACAAATCATTCTAGTTGTTTGAGGGTCCAATGCGTTGGTACTGGACAAAACGATGATGGGTTTTATATGAGAAGATGTGTAGAGCTTGCAAGGAAGGCAGTTGGGCATACCAGTCCCAATCCAGTGGTAGGATGTGTTATTGTGAAGGATGGGAAAGTTGTTGGTGAAGGCTTTCACCCTAAAGCAGGGCAACCTCATGCCGAGGTGTTTGCTTTGAGGAATGCGGGCGATTTGGCAGAGAATGCGACAGCTTATGTAAGCTTGGAACCATGCAATCATTTTGGGAGAACTCCACCATGTACTGAAGCTCTAATCAAAGCCAAAGTGAAAAAAGTCGTGGTTGGAATGGTGGATCAAAATCCAACTGTGGCCTCAAGAGGGGTAAAGAGGCTAAGAGATGCAAGCATTGAAGTTGTCGTAGGTGTAGAAGAAGAATTATGCAAGAGGCTTACTGAAGCCTTTACCCATCGCATGTTGACTGGGAAACCTTTCCTTACAGTAAGGTATTCCCTTTCTGTCAATGGAAACTTGTTGGATCAACTTGGAGAAGGAGTTATAGAATCAGGTGGATACTATTCACGGTTATTACAAGAATATGATGCACTAGtagtttcttcttccttaTTGAGTGAAAATATCTCACTACCGTCATCTCGAGAACCTGGAGCCAATCAACCCCTTCATATTATAATACAAAGAAGTTCCACTTCTTCAATCCCAATTCCTATGATCAATGACGAAGTTACTGGTAAAGTGATAGTATTTACAGATAGTATGACAGGAGCAGCTCCAGAAGTGGCTCAAAAAGGAATTGAAACTGTGGCTCTGGATCAGATAAACTTGGATGTTATCTTGGATTATTGCTATCGTCAAGGATTGTGCAGTGTTCTGTTGGACCTTAGGGGGCCTTTTGTAGATTTTGAAGAGCTTATAAAGGAGGGTATGgagaaaaagtattttaataaatttgtgacaGAAATTTTGCCAGCTTGGAATGGATGTGCTAAGGAGGATTCTGCAATGACATTAAAGAGCTTAGGACAAGGACTAGAAGTGACTAATTTACTGTCCAAGTCCTCACATGGAAGTGTTGTGATTGAGgggtattttaaatttta 1415 0.4092 MNCTSRSKNQPKFASFQGNADHSWAVQIEVMKIYGLGCLHFFSHLFSDCILHPPRVLPYAAPQMLMSSLPAQNHAKLGFKLKLTSGFSESLVRVPIMPLTNHSSCLRVQCVGTGQNDDGFYMRRCVELARKAVGHTSPNPVVGCVIVKDGKVVGEGFHPKAGQPHAEVFALRNAGDLAENATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDQNPTVASRGVKRLRDASIEVVVGVEEELCKRLTEAFTHRMLTGKPFLTVRYSLSVNGNLLDQLGEGVIESGGYYSRLLQEYDALVVSSSLLSENISLPSSREPGANQPLHIIIQRSSTSSIPIPMINDEVTGKVIVFTDSMTGAAPEVAQKGIETVALDQINLDVILDYCYRQGLCSVLLDLRGPFVDFEELIKEGMEKKYFNKFVTEILPAWNGCAKEDSAMTLKSLGQGLEVTNLLSKSSHGSVVIEGYFKF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01886 471 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 116 238 IPR002125 -
Bva02g01886 471 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 93 308 - -
Bva02g01886 471 Gene3D Dihydrofolate Reductase, subunit A 256 467 IPR024072 -
Bva02g01886 471 SUPERFAMILY Dihydrofolate reductase-like 262 397 IPR024072 -
Bva02g01886 471 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 118 215 IPR002125 -
Bva02g01886 471 Gene3D Cytidine Deaminase, domain 2 111 255 - -
Bva02g01886 471 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 122 399 IPR004794 GO:0008835|GO:0009231
Bva02g01886 471 CDD Riboflavin_deaminase-reductase 122 233 - -
Bva02g01886 471 SUPERFAMILY Cytidine deaminase-like 118 257 IPR016193 GO:0003824
Bva02g01886 471 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 165 203 IPR016192 GO:0008270|GO:0016787
Bva02g01886 471 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 93 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01886 K11752 - gmx:100786393 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01886 02 20482310 20484940 Bva02g01886 02 20482310 20484940 ECH