Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01859 atggcaGAAGAAGCAGTAGCAAAGAGATATGCAGTCGTCACTGGAGCAAACAAAGGTATAGGATTTGGGATATGCAAGCAATTAGCTTCTAATGGGATCAGAGTGTTACTCACAGCCAGAGATGAGAAGAGGGGTCTTGAAGCTGTTGAAAAGCTCCGAGAGCTTGGCTTGTCTGACCGAGTGATTTTTCATCAGCTTGATATAACTGACCATGCTAGCATAGCAACCCttgaaaatttcatcaaaaccCACTTTGGAAAACTGGATATCTTGGTAAATAATGCAGGAATACCTGgattaattattgatgaaGATGCTTTAAAAGCTTTTGGTCCTCCTGGGGAAAGAGCTGAGAATATTGATTGGAGTAAAGTCACATCTCAAACTTATGAATTTGCAGAAACTGGTGTTAGAACGAACTACTATGGTGCTAAAGAAATGTGTGAAGCACTCATTCACCTTCTAAAGTTGTCAAATTCACCAAGAATTGTTAATGTTTCCGCCTCCGCTGGGAAGTTAGAGAAAATACCAAGTGGATGGGCTAAAGATGTTCTGTCTGATGTTGAAAGCTTAACAGAAGAGAAATTGGATGAGGTTTTGAATCAGTTTCTGAAGGATTTTAAAGAGAATGCATTAGAAGCCAAAGGCTGGCCCACTGCTATCCCAGCGTATACAGTCTCAAAAGCTGCTCTCAATGCCTACACAAGGATTCTGGCAAACAAGTTCCCATCTTTCTGCATCAATGCTGTTTGCCCTGGTTATGTGAAAACAGATATAAACTACAATGCTGGCATTTTTTCTGTTGATGAAGGTGCTGAATGTATTGTGAAGTTGGCCCTGTTACCTGACGGTGGCCCTTCTGGCCTCTTCTTCTATCGGAGCCAAGTGGATTCATTTTG 899 0.4004 MAEEAVAKRYAVVTGANKGIGFGICKQLASNGIRVLLTARDEKRGLEAVEKLRELGLSDRVIFHQLDITDHASIATLENFIKTHFGKLDILVNNAGIPGLIIDEDALKAFGPPGERAENIDWSKVTSQTYEFAETGVRTNYYGAKEMCEALIHLLKLSNSPRIVNVSASAGKLEKIPSGWAKDVLSDVESLTEEKLDEVLNQFLKDFKENALEAKGWPTAIPAYTVSKAALNAYTRILANKFPSFCINAVCPGYVKTDINYNAGIFSVDEGAECIVKLALLPDGGPSGLFFYRSQVDSF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01859 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Bva02g01859 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 IPR002347 -
Bva02g01859 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Bva02g01859 299 Gene3D - 1 299 - -
Bva02g01859 299 CDD carb_red_PTCR-like_SDR_c 9 296 IPR045313 GO:0016616
Bva02g01859 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 6 299 - -
Bva02g01859 299 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 211 239 IPR020904 GO:0016491
Bva02g01859 299 Pfam Enoyl-(Acyl carrier protein) reductase 216 263 - -
Bva02g01859 299 PRINTS Glucose/ribitol dehydrogenase family signature 86 97 IPR002347 -
Bva02g01859 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Bva02g01859 299 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Bva02g01859 299 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Bva02g01859 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Bva02g01859 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 6 299 - -
Bva02g01859 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 284 IPR036291 -
Bva02g01859 299 Pfam short chain dehydrogenase 10 173 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01859 Bva-Chr2 20367140 20369134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01859 11 260 Miscellaneous Gene Families AT2G29150 26.482 4.00e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01859 K15095 - gmx:106797124 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01859 02 20367140 20369134 Bva02g01859 02 20367140 20369134 ECH