Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01858 ATGGCAGAAGAAGAAATCAGGTATGCAGTTGTCACAGGAGCAAATAAGGGAATAGGGCTTGCCATAAGCAAGCAATTAGCTTCTAATGGGATCACAGTGTTGCTTACAGCCAGGGATGAGAAGAAGGGTATTGAAGCTGTTGAGAAACTGAAAAACCTTGGTCTCACTGgccaaatattttttcatcagCTTGATGTGATTGATCCAGCTAGCATAGCATCCCTTGCAGATTTCATTAAAGCTCAGTTTGGGAAACTTGATATCTTGgtAAACAATGCGGGGGCTAATGGAGCAATTGTAGACCCTGATGCTTTGGCTGCTGCAGGGATTGCGGAAAAGGGGATGAATGTTGATTGGAGTAAAATTATGACTGAAAATTACGAATTGGCTGAAGTAGCTGTTAAAACAAACTACAATGGTGCTAAAGCGTTGTCTCAAGCACTCATTCCCCTTCTCCAGTTATCCAAATCTCCAAAAATCATTAGTATCTCCGCTGCCATGGGAATGTTGGAGAATTTACCAAATGGATGGGCAAAAGAAGTGCTAAGTGATGTTGAAAACCTTGATGAAGAAGAGATTGATGAGATTTCAAGCCAGTTTCTGAAAGATTTTAAAGAGAATGCATTAGAAGCCAAAGGCTGGCCTACTGCTATGTCTGCATATAGTGTCTCCAAAGCTGCTTTGAATGCCTACACAAGGGTTCTGGCAAAGAAGCACCAATCTTTCTGCATCAATGCCGTTGTGCCTGGTTATGTGAAAACTGATATGACCTGCAATACAGGCACAATGACTCCAGATGAAGGCGCTGAAGGTGCTGTGAGGTTGGCTTTGCTGCCTAATGCTACCCCTTCTGGCCTCTTCTTCTTTAAAAGTCAACAGTTATCATTTTG 890 0.4157 MAEEEIRYAVVTGANKGIGLAISKQLASNGITVLLTARDEKKGIEAVEKLKNLGLTGQIFFHQLDVIDPASIASLADFIKAQFGKLDILVNNAGANGAIVDPDALAAAGIAEKGMNVDWSKIMTENYELAEVAVKTNYNGAKALSQALIPLLQLSKSPKIISISAAMGMLENLPNGWAKEVLSDVENLDEEEIDEISSQFLKDFKENALEAKGWPTAMSAYSVSKAALNAYTRVLAKKHQSFCINAVVPGYVKTDMTCNTGTMTPDEGAEGAVRLALLPNATPSGLFFFKSQQLSF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01858 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 281 IPR036291 -
Bva02g01858 296 CDD carb_red_PTCR-like_SDR_c 7 292 IPR045313 GO:0016616
Bva02g01858 296 Gene3D - 4 296 - -
Bva02g01858 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Bva02g01858 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Bva02g01858 296 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Bva02g01858 296 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
Bva02g01858 296 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Bva02g01858 296 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Bva02g01858 296 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Bva02g01858 296 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 208 236 IPR020904 GO:0016491
Bva02g01858 296 Pfam short chain dehydrogenase 8 169 IPR002347 -
Bva02g01858 296 Pfam short chain dehydrogenase 217 259 IPR002347 -
Bva02g01858 296 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 296 - -
Bva02g01858 296 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01858 Bva-Chr2 20364733 20366098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01858 9 257 Miscellaneous Gene Families AT2G29150 26.190 6.29e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01858 K15095 - gmx:100803877 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01858 02 20364733 20366098 Bva02g01858 02 20364733 20366098 ECH