LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva02g01855	ATGGCAGAAGAATCAAAAAGGTATGCTGTTGTGACTGGAGCAAATAAGGGGATCGGTTACGGGATATGTAAGAAGCTGGCTTCAAGTGGGGTCGTGGTGGTGCTAACAGCTAGAAATGAGAAGAGAGATTTCATCAAAACTCAATTTGGGAAACTTGATATCTTGGTGAACAATGCAGGAGTAGCTGGAGGCATAGTCGATCACGATGCTCTGATTAGATATAGAAATGGTGAAAAAGTTGATTGGAATGAAATCTTAAAACAAGATTATGAGATGACTGAGGAGTGTGTGAGAACAAATTACTATGGTGCAGAAAGAGTGATTGAAGCTCTTCTTCCCTTACTCCAGTTATCCACTTCACCAAGGATTGTCAATGTTTCATCAAAGATGGGGTCCTTGAAGAATGTGCCAAGTGAGCGGGTGAAAACAGTGTTGAGTGACATTGAAAGCCTCACTAAAGAAAGAATAGACGAGGTGATCAGAGAATTTCTGAAAGATTACAAAGAGGGTTCATTGGAAAGCAAAGGGTGGCCAACACGTGTTTCTGGTTACACAGTGGCAAAAGCAGCTCTGAATGCTTACACAAGAATGTTGGCAAACAAGTTCCCTCATGCTAAAGTGAATTGTGTCTGCCCTGGCTATGTCAAGACTGATATCAACCTCAACACCGGCATTTTAAGCATTGATGATGGTGCTGAAAATCCTGCAAAGCTTGCGCTCTTGCCAGATAATGGTCCTTCTGGCCTCTTCTTTTCTCTGGGTGAAGTCGTACCATTTTG	779	0.4236	MAEESKRYAVVTGANKGIGYGICKKLASSGVVVVLTARNEKRDFIKTQFGKLDILVNNAGVAGGIVDHDALIRYRNGEKVDWNEILKQDYEMTEECVRTNYYGAERVIEALLPLLQLSTSPRIVNVSSKMGSLKNVPSERVKTVLSDIESLTKERIDEVIREFLKDYKEGSLESKGWPTRVSGYTVAKAALNAYTRMLANKFPHAKVNCVCPGYVKTDINLNTGILSIDDGAENPAKLALLPDNGPSGLFFSLGEVVPF	259

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva02g01855	259	Gene3D	-	43	259	-	-
	Bva02g01855	259	Gene3D	-	2	42	-	-
	Bva02g01855	259	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	7	251	IPR036291	-
	Bva02g01855	259	ProSitePatterns	Short-chain dehydrogenases/reductases family signature.	171	199	IPR020904	GO:0016491
	Bva02g01855	259	PRINTS	Short-chain dehydrogenase/reductase (SDR) superfamily signature	184	203	IPR002347	-
	Bva02g01855	259	PRINTS	Short-chain dehydrogenase/reductase (SDR) superfamily signature	50	61	IPR002347	-
	Bva02g01855	259	PRINTS	Short-chain dehydrogenase/reductase (SDR) superfamily signature	121	129	IPR002347	-
	Bva02g01855	259	PANTHER	NAD(P)-BINDING ROSSMANN-FOLD PROTEIN	43	259	-	-
	Bva02g01855	259	PANTHER	NAD(P)-BINDING ROSSMANN-FOLD PROTEIN	1	44	-	-
	Bva02g01855	259	PRINTS	Glucose/ribitol dehydrogenase family signature	203	220	IPR002347	-
	Bva02g01855	259	PRINTS	Glucose/ribitol dehydrogenase family signature	50	61	IPR002347	-
	Bva02g01855	259	PRINTS	Glucose/ribitol dehydrogenase family signature	8	25	IPR002347	-
	Bva02g01855	259	PRINTS	Glucose/ribitol dehydrogenase family signature	115	131	IPR002347	-
	Bva02g01855	259	PRINTS	Glucose/ribitol dehydrogenase family signature	184	203	IPR002347	-
	Bva02g01855	259	PANTHER	(+)-NEOMENTHOL DEHYDROGENASE	43	259	-	-
	Bva02g01855	259	PANTHER	(+)-NEOMENTHOL DEHYDROGENASE	1	44	-	-
	Bva02g01855	259	Pfam	Enoyl-(Acyl carrier protein) reductase	175	226	-	-
	Bva02g01855	259	Pfam	short chain dehydrogenase	8	42	IPR002347	-
	Bva02g01855	259	Pfam	short chain dehydrogenase	44	133	IPR002347	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva02g01855	Bva-Chr2	20357597	20359733	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva02g01855	K15095		-	gmx:100802560	356.295

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva02g01855	02	20357597	20359733	Bva02g01855	02	20357597	20359733	ECH