Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01852 ATGGCAGCGGCAAAATATGCTGTTGTTACAGGCGCAAACAAAGGGATAGGATTGGAGACTCTTGATGTGACGGACCCTGCTAGTATTGCATCTTTAGCAGATTTCGTCAAAACCCAGTTTGGGAAACTCGATATCTTGGTAAACAATGCAGCAATTAGTGGAGTCAATTTGGATGAGGTGGCGGGATCGTCAATCAACTGGAATAAACTGGCCCAAACTTACGAATTGGCTGAAAACTGCCTAAAAACGAACTACTATGGTGCTAAGAAAACAGCTGAGGCATTACTTCCCTTTCTTCAGTTATCCAACTCTCCTAGAATTATTAATGTTTCCTCCTCAGGAGGGTTGTTAAAGAGCATATCCAATGAATGGGCTAGAGGGGTGTTGGAAGACATTGAAAATCTCACAGAAGACAGAATAGATGAGGTATTGAAGGAGTTCGTCAAAGACTTCAAAGAAGGCTCGTTAGAAACAAATCGCTGGCCTACCTTTCTGTCTGCATATGTGGTCTCTAAAGCAGCTCTGAATTCATACACAAGAATTCTGGCAGCAAAGTACCCTAGTTTTTGCGTTAACTGTGTGTGCCCTGGTTTTGTGAAAACAGACATGAACAGAAACAGTGGTATCTTGTCTGCAGAAGATGGTAGTGCCAGTGTTGTAAGGTTAGCCCTGCTGCCAGATGGAGGCCCTTCTGGCCTCTTCTTTGCTCGGCAAGAAGTGTCCAGCTTTTG 731 0.4391 MAAAKYAVVTGANKGIGLETLDVTDPASIASLADFVKTQFGKLDILVNNAAISGVNLDEVAGSSINWNKLAQTYELAENCLKTNYYGAKKTAEALLPFLQLSNSPRIINVSSSGGLLKSISNEWARGVLEDIENLTEDRIDEVLKEFVKDFKEGSLETNRWPTFLSAYVVSKAALNSYTRILAAKYPSFCVNCVCPGFVKTDMNRNSGILSAEDGSASVVRLALLPDGGPSGLFFARQEVSSF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01852 243 PRINTS Glucose/ribitol dehydrogenase family signature 99 115 IPR002347 -
Bva02g01852 243 PRINTS Glucose/ribitol dehydrogenase family signature 6 23 IPR002347 -
Bva02g01852 243 PRINTS Glucose/ribitol dehydrogenase family signature 41 52 IPR002347 -
Bva02g01852 243 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Bva02g01852 243 PRINTS Glucose/ribitol dehydrogenase family signature 187 204 IPR002347 -
Bva02g01852 243 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 20 243 - -
Bva02g01852 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 41 52 IPR002347 -
Bva02g01852 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Bva02g01852 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 113 IPR002347 -
Bva02g01852 243 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Bva02g01852 243 Pfam Enoyl-(Acyl carrier protein) reductase 165 210 - -
Bva02g01852 243 Gene3D - 20 243 - -
Bva02g01852 243 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 20 243 - -
Bva02g01852 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 228 IPR036291 -
Bva02g01852 243 Pfam short chain dehydrogenase 21 119 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01852 Bva-Chr2 20345661 20347641 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01852 K15095 - gmx:100778451 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01852 02 20345661 20347641 Bva02g01852 02 20345661 20347641 ECH