Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01842 ATGGCTGCTTCTTCTTCGCATGCTCGTCCTTCATTATCTCGCTTTTCTGTCACTTCCAGACCTTCACCGCCGCAATTTGTTCTCTTCAACTTTCCTCCAACAAGAACCGCCCATAATCGAACCGGAATAGCCCGGTTCAAGTGCTCGGCCGGGCAGACCGGGTTTTTCACGAAACTTGGCCGGTTGTTGAAGGAGAAGGCCAAAAGCGATGTGGAGAAGATCTTCTCCGGTTTCTCTAAGACTCGAAACAACCTCGCCGTGATCGATGAGCTCTTGCTTTACTGGAACCTGGCTGACACTGACAAAGTTCTGGACGAACTCGAAGAGGCTCTTCTGGTGTCTGATTTTGGGCCAAAAATCACTATTAAGATTGTGGAGAACTTGCGTGAAGATATATTATCTGGGAAGCTTAAATCAGGGAATGAGATAAAGGAAGCATTGAAGAAGAATGTTTTGGAATTATTAACCAGGAAGGGGAGTAAAACTGAACTTCAACTCGGATTCAGGAAACCGGCTGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAGACCACATCTCTGGGAAAGCTGGCCTTCAGATTGAAGAATGAAGGGGCTAAGATACTGATGGCGGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTGGAAATATGGGCCGAGAGAACTGGGTGCGAGATTGTTGTTGCTGAATCTGAGAAAGCCAAAGCATCATCAGTGCTTTCGCAGGCTGTGAGAAAGGGAAAAGGAGAAGGTTTTGATGTCGTATTATGTGATACATCAGGACGTCTGCACACTAATTACAGCCTAATGGAAGAGTTGATTTCTTGTAAAAAGGCTATAGGCAAAGTAATACCTGGTGGTCCTAATGAGATTCTGCAGGTTTTGGATGGAACGACTGGTTTGAATATGCTGCCACAAGCGAGAGAGTTCAATGAAGTTGTAGGGGTTACTGGTTTGATTTTGACCAAACTGGATGGTACTGCTAGGGGTGGCTGTGTGgtCAGCGTGGTTGATGAGCTTGGAATCCCTGTGAAATTTGTGGGTGTCGGAGAAGGTGTGGAAGACCTTCAACCCTTCGATGCAGAGGCCTTTGTCAATGCCATTTTCATGTA 1121 0.4594 MAASSSHARPSLSRFSVTSRPSPPQFVLFNFPPTRTAHNRTGIARFKCSAGQTGFFTKLGRLLKEKAKSDVEKIFSGFSKTRNNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPKITIKIVENLREDILSGKLKSGNEIKEALKKNVLELLTRKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAFRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLSQAVRKGKGEGFDVVLCDTSGRLHTNYSLMEELISCKKAIGKVIPGGPNEILQVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGTARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01842 373 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 71 148 IPR036225 -
Bva02g01842 373 SMART SRP54_3 171 373 IPR000897 GO:0005525|GO:0006614
Bva02g01842 373 MobiDBLite consensus disorder prediction 1 20 - -
Bva02g01842 373 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 346 359 IPR000897 GO:0005525|GO:0006614
Bva02g01842 373 Gene3D - 163 373 IPR027417 -
Bva02g01842 373 Gene3D - 61 162 IPR042101 -
Bva02g01842 373 PANTHER BNAA04G26420D PROTEIN 18 372 - -
Bva02g01842 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 371 IPR027417 -
Bva02g01842 373 CDD FtsY 172 371 - -
Bva02g01842 373 SMART AAA_5 170 343 IPR003593 -
Bva02g01842 373 SMART SRP54_N_2 74 155 IPR013822 GO:0005525|GO:0006614
Bva02g01842 373 Pfam SRP54-type protein, helical bundle domain 100 149 IPR013822 GO:0005525|GO:0006614
Bva02g01842 373 Pfam SRP54-type protein, GTPase domain 171 372 IPR000897 GO:0005525|GO:0006614
Bva02g01842 373 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 18 372 - -
Bva02g01842 373 TIGRFAM ftsY: signal recognition particle-docking protein FtsY 100 372 IPR004390 GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01842 Bva-Chr2 20296130 20299398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01842 K03110 - gmx:100791073 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01842 02 20296130 20299398 Bva02g01842 02 20296130 20299398 ECH