Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01839 ATGGATCAACGACGTCGTGCGAGTGAACGAACCCTGGAGGTGACCGTTTTATCCTGCGAAAATCCCACCGTAGACGGAAAGCCGGTGACCAAGAACGTCTGCGTTGTGCTTCGAACGGAGTCCATCAACTCCTTCGCGACGGGAATGGCTGCGGCGGAAGGAGGAAAATGCCCTTCGTGGAACGAGAAATTCTCTGTGAACATGCCCGTGCATGCCAGGTCTATCACGTTCGAGGTACAATGTAAGACGACAATGGGAGTCAAGAGCATTGGAATCGCGAGGATAGCGCTGTCGGATTTCCTCGGAGGGAATGTGCCGGAGGGTTACTTGCAGTTCCTGAGTTACAGGTTGAGAGACAGGGACGGCAGGAGAAGTGGGATTATTAATTTCTCGGTGAGGGTGACCTCGCCGGAATATTCAGAGCCGCCTGTGAAACCCTCCAAGGGGACGGTGGTGAGTGACCATTGTTATGGTGGGTTGCACAATATGCGAGGCGGCGAGGAGAATGGAAACCAAGTTGTGATTGGCATTCCAGTTTGTTGGTGGAACTATCCTATTCAAACCAATGTttg 572 0.5227 MDQRRRASERTLEVTVLSCENPTVDGKPVTKNVCVVLRTESINSFATGMAAAEGGKCPSWNEKFSVNMPVHARSITFEVQCKTTMGVKSIGIARIALSDFLGGNVPEGYLQFLSYRLRDRDGRRSGIINFSVRVTSPEYSEPPVKPSKGTVVSDHCYGGLHNMRGGEENGNQVVIGIPVCWWNYPIQTNV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01839 190 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 136 IPR035892 -
Bva02g01839 190 Gene3D C2 domain 9 135 IPR035892 -
Bva02g01839 190 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Bva02g01839 190 SMART C2_3c 11 109 IPR000008 -
Bva02g01839 190 Pfam C2 domain 11 108 IPR000008 -
Bva02g01839 190 CDD C2_SRC2_like 11 130 IPR044750 GO:0006952
Bva02g01839 190 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 9 188 - -
Bva02g01839 190 PANTHER INGRESSION PROTEIN FIC1 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01839 Bva-Chr2 20285851 20286630 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01839 - - qsu:111991619 157.147