Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01785 ATGGCGGACCTTGGCATCACCACGCCTCTCCTTTCTTCCCAACCCTCCGATCAGGTAATCCTGACGATACGTGATGATGCTGAATCCGCTTCCGAGCCCCTCCCTCAACCGGCCCTTGAACAACGATCTCCGAGCCAATCCCACAATCCAAATCACAATCATAATAATCGAAACACCAATTTGAGTTCCGGAAACCCATTTAGATTTATCGGTTGCGAGGAGCTGCATGTGCCTTCTCCGACCACGGTGGACCCGTTTAGGAATAATACGCCCACCATTGATGGAGTTTATGAATGGTTGAAAATTGTGATTTGCTTACCTATTGCATTGGTTCGGCTTGTTCTTTTCGGGCTTTGTCTTCTGGTTGGGTATATCGCGACAAAATTGGctcttgaaggatggaaggacaAGCAGAACCCAATGCCTAGGTGGAGATGCAGGCTCATGTGGGTGACAAGAATCTGTACCCGCTgcattcttttctcttttggCTATCATTGGATAAAACGGAAGGGAAAACCTGCACCTAGGGAAATTGCTCCAATAGTTGTATCTAATCATGTATCATACATTGAACctatattctatttctatgAATTATTTCCCACCATTGTGGCTGCAGAGTCCCATGACTCGATACCTTTTGTTGGCACCATTATCAGAGCAATGCAGGTGATATATGTCAACAGGTTTGTACCATCATCAAGGAAGCAGGCTGTCAAGGAAATAAAgAGACGAGCTTCTTGCAATAGATTTCCTCGAGTACTATTATTTCCTGAAGGAACCACAACTAATGGAAGGAATCTCATCTCCTTCCAACTTGGTGCATTCATACCTGGTTACCCAATCCAGCCTGTAATTGTTCACTATCCTCATGTGCATTTTGATCAATCCTGGGGTCATATTTCTTTGGCAATGCTTATGACCAGGATGTTCACTCAGTTCCACAATTTCTTAGAGGTTGAATACCTTCCAGTCATTTCACCCTCGGATGATAAAAAGGAAACTGCTGTGCATTTTGCTCAGAGGACTAGCCATGCTATTGCAACTGCACTGAACACTGTACAAACAGGACATTCTTATGGAGATATAATGCTTCATATGCAAGCACATCAGGCAAAACAGGTGAATCCCTCCATTTATATGATTGAAATGGCAAAAGTGGAATCAtTATTCCGTATCAGCAGTGTGGAAGCTCTGGACTTTCTGGATAAATTCCTGTCTATGAATCCTGATCCCAGTGGTCGTGTTCAATATTATGACTTCTTGAGGGTTTTATCACTTAAGGCTTGCCCTTTATCCGAAGATATTTTTGCATTTGTTGATGTGGAGAAGAGTGGCTCAATTACATTTAGACAGTTCTTATATGGATCTGCATATGTCATGAAGCAGCCATCATTCCGTCAAGCCTGTGAATTAGCTTTCTCTAAATGCGGTGCTGCAGTAAAGGACTACATCGTAGAACAAGAATTACGGGATTCCATCCAACATGCTATCCCTTTAACGAAGGAGGATGAGGTTCACGAGCTTTTCgtattatttgataatgataACAATGGCAGAGTGAGTAAGgaagattttctttcttgcctCAAGAGAAATCCTCTGCTAATAGCACTCTTCACCCCTCCGCTACAGCACTA 1643 0.4102 MADLGITTPLLSSQPSDQVILTIRDDAESASEPLPQPALEQRSPSQSHNPNHNHNNRNTNLSSGNPFRFIGCEELHVPSPTTVDPFRNNTPTIDGVYEWLKIVICLPIALVRLVLFGLCLLVGYIATKLALEGWKDKQNPMPRWRCRLMWVTRICTRCILFSFGYHWIKRKGKPAPREIAPIVVSNHVSYIEPIFYFYELFPTIVAAESHDSIPFVGTIIRAMQVIYVNRFVPSSRKQAVKEIKRRASCNRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVHYPHVHFDQSWGHISLAMLMTRMFTQFHNFLEVEYLPVISPSDDKKETAVHFAQRTSHAIATALNTVQTGHSYGDIMLHMQAHQAKQVNPSIYMIEMAKVESLFRISSVEALDFLDKFLSMNPDPSGRVQYYDFLRVLSLKACPLSEDIFAFVDVEKSGSITFRQFLYGSAYVMKQPSFRQACELAFSKCGAAVKDYIVEQELRDSIQHAIPLTKEDEVHELFVLFDNDNNGRVSKEDFLSCLKRNPLLIALFTPPLQH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01785 547 MobiDBLite consensus disorder prediction 36 62 - -
Bva02g01785 547 Pfam EF-hand domain pair 486 533 IPR002048 GO:0005509
Bva02g01785 547 Pfam Acyltransferase 178 285 IPR002123 GO:0016746
Bva02g01785 547 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
Bva02g01785 547 Gene3D - 384 537 - -
Bva02g01785 547 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 43 542 - -
Bva02g01785 547 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 43 542 - -
Bva02g01785 547 SMART plsc_2 181 291 IPR002123 GO:0016746
Bva02g01785 547 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 143 355 - -
Bva02g01785 547 CDD LPLAT_LPCAT1-like 157 365 IPR045252 GO:0008374
Bva02g01785 547 SUPERFAMILY EF-hand 380 544 IPR011992 -
Bva02g01785 547 SMART efh_1 506 534 IPR002048 GO:0005509
Bva02g01785 547 SMART efh_1 433 461 IPR002048 GO:0005509
Bva02g01785 547 ProSiteProfiles EF-hand calcium-binding domain profile. 502 537 IPR002048 GO:0005509
Bva02g01785 547 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01785 Bva-Chr2 20014060 20021478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01785 131 355 Acyl Lipid Metabolism Gene Families AT1G80950 33.465 1.16e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01785 K13510 - gmx:100818109 798.505