Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01689 ATGGCTGGGGGTTCTGATGTGGCCGAGAGTGCTCTCTCTTGTGCTAACTGTGGAAAGCCTGCTCATCTTCAgtgTCCAAAATGCATGGAATTGAAGCTTCCCCGTGAAGATTCTGCTTTCTGCACTCAGGATTGTTTCAAGTCCTCATGGAGCTCCCACAAGTCAGTGCATTTGAAGGCAAGACTTTCCTCAGTTGGGACAGGTACTACAGGCGAGCAAAATTCAGATGCACTTGGTGAAGGTTGGCAATATTGCGTGAAGAAAGGGCAGGCTCGAACTCCAAAGCTTCCTTATTTTGATTGGACTGGGGCACTGAGGCCATATCCCATATCCAACAAGCGAATTGTACCAGCTCATATTGATAAACCTGACTGGGCTAAAAATgGAATTCCCAAAATTGAGCTCAATAGTGATCTGCAGCATATTGTTGAGatCAAAACTCCAGAACAAATTGAGAGAATGAGAGAAACTTCTCGAATTGCAAGGGAAGTTCTAGATGCAGCTGCCCGTGCTATTCAGCCTGGTGTGACAACCGATGAGATTGACAGAGTTGTCCATGAGGCTACTATTGCTGCTGGGGGATATCCATCTCCTCTCAATTACCATTTCTTCCCAAAATCTTGCTGCACGTCAGTCAATGAAGTAATCTGCCATGGAATTCCTGATGCAAGGAAGCTCGAGGATGGTGATATTGTAAATATTGATGTCACTGTGTACTATAAAGGTGTTCATGGTGATCTCAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTAGACGGCTGGTACAATGTACATATGAGTGCCTGGAGAAAGCAATAGCTATTGTAAAACCTGGGGTACGATTTCGTGAGATTGGAGAAGTTATTAATCGACATGCTTCAATGTCTGGCTTCTCTGTGGTAAAATCATATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCGCCAAATATTCCCCATTATGGAAAAAATAAAGCAGTTGGTGTGATGAAAGCTGGACAAACGTTCACAATTGAACCAATGATCAATGCAGGTGTCTGGCGTGATAGAATGTGGCCTGATGGATGGACTGCTGTCACTGTAGATGGCAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACTGAGACTGGAGTTGAGGTTCTAACAGCGCGGTTACCAACTTCTCCCAATGTTTTTCCTTGGTTAAGTTCATA 1208 0.4379 MAGGSDVAESALSCANCGKPAHLQCPKCMELKLPREDSAFCTQDCFKSSWSSHKSVHLKARLSSVGTGTTGEQNSDALGEGWQYCVKKGQARTPKLPYFDWTGALRPYPISNKRIVPAHIDKPDWAKNGIPKIELNSDLQHIVEIKTPEQIERMRETSRIAREVLDAAARAIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNVDEESRRLVQCTYECLEKAIAIVKPGVRFREIGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGKNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTVDGKRSAQFEHTLLVTETGVEVLTARERVTVP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01689 395 PRINTS Methionine aminopeptidase-1 signature 208 221 IPR001714 -
Bva02g01689 395 PRINTS Methionine aminopeptidase-1 signature 331 343 IPR001714 -
Bva02g01689 395 PRINTS Methionine aminopeptidase-1 signature 300 312 IPR001714 -
Bva02g01689 395 PRINTS Methionine aminopeptidase-1 signature 230 246 IPR001714 -
Bva02g01689 395 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 144 388 IPR002467 GO:0006508|GO:0070006
Bva02g01689 395 Hamap Methionine aminopeptidase [map]. 143 389 IPR002467 GO:0006508|GO:0070006
Bva02g01689 395 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 306 324 IPR002467 GO:0006508|GO:0070006
Bva02g01689 395 CDD MetAP1 151 387 IPR002467 GO:0006508|GO:0070006
Bva02g01689 395 SUPERFAMILY Creatinase/aminopeptidase 97 389 IPR036005 -
Bva02g01689 395 Gene3D Creatinase/methionine aminopeptidase superfamily 99 393 IPR036005 -
Bva02g01689 395 PANTHER METHIONINE AMINOPEPTIDASE 1 12 390 - -
Bva02g01689 395 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Bva02g01689 395 Pfam Metallopeptidase family M24 152 380 IPR000994 -
Bva02g01689 395 PANTHER METHIONINE AMINOPEPTIDASE 12 390 - -
Bva02g01689 395 Gene3D - 4 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01689 Bva-Chr2 19405195 19411180 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01689 K01265 - zju:107406731 731.095