Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01630 ATGACGAATTTCTCGTCAACAGCTTCGAATCAGATTAGGTTCCTGCTGGAGAGCTTGAACGAAGTCAACTTTGATTCCATTTTTCAGGAACTTTGCCGGTTTGCTGAATATGGAACTGATGGAAGTATTTTGCTGCTTCAAACATGCTTGGATCACCTGAATTTGTTTAGGATAGATCTAAAGGACATTGTGCAGGAGCCAATTCTTGGGGCAGTCATTAGGTACCTCTTGGACAAACCAAATTTCAGTACGGTGTTTACTGAGTCACTGAAGGATGCAGAAATCAGTGAAGGCTTTTTAGAAAGTTTTTCTAATGGATTGCAGTTATCTTTGTTGGAAAAGATTGCCATCAGTCTTGCTTTATCTGATTCTGAAAATCTTGAAACCAGGCTATGTGGCAAGAATTTCTGTCTGACTCAAATTGAGGAATTATGCACCAATCCCAGCTCTTTGAGTTGCTCTGAGCAAATTCAGCATATTATCATGTTCCTTAAGAGGAGTGAAGGCCTATCCAAGCATGTGGATTCATTTATGCAGATGATATCACTGGTGCAGCCAAAAGACGCACAACCATTTGTTCTGATTCCACTGCTATCTGATGAGATACGTGAGACCAATTTCTTAAGGGATATGGAGTTGTTCCATGAGTGTGGAGACAATGATTTTGATGCTATCTTAGCAGACATACAGAAGGAAATGAACATGGGAGACATTGTGAAGGAACTAGGCTATGAGTGCACAGTTAGTGTATCACAGTGCAAggaaattttctctcttttcttgccTTTAACTGAAAATACCATCGCTAAATTACTTGGTGCTATTGCTCGTACCCACATGGGGTTGGAAGATAATCAGAGCTTATTCTTAACTTTTGGCATGGCCCTTGGTCTCAGCACTTTGTCTGAGTTGCCACCATTAAACTCTTGGAATATTGATGTCTTGATAGATACAATCAAGCATCTTGCACCTGGAACCAATTGGGTACGGGTTATTGAAAATCTAGATCATGAAGGATTTTTCCTTCCTAACGAAGAAGCATTCTCTTTTCTCATGGCTGTATACAGACATGCTTGTCAGGAGCAATTTCCTCTCCATGCTATATGCGGATCTGTCTGGAAGAATGCCGAGGGCCAGCTATCTTTCCTTAAATACGCTGTATCTGCACCACCAGAAGTATTCACCTTTGCACACTCAGTGAGGCAGTTGGCATATATGGATGCAATTAATGGTCACAAGCTTCAACGTGGAGATGCCAATCATGCATGGTTGTGTCTTGACCTATTAGATGTACTCTGCCAGCTAGCTGAGTGGGGTTATGCTAGTACTGTTAGATCAATTCTGGATTATCCTCTCAAACATTGTCCTGAAATCTTGCTTCTTGGGATGGCGCATGTTAATACTGTTTACAACCTCCTCCAGCATGAAGTATCTCTCATTGCCTTTCCAATGATAGTAAAAGGTGCAGTAGGCAGTGGTGTGATTGGATATCTTTGGAATGTTAATCCTAATCTTGTTTTGCGGGGGGTTATTGATTCTCAAAACAATGATCTTGACTGCATTACAAGGATTTTGGACATCTTCCAGGAGCTAAAGATTTTATTATCAGTGTTGGAGATGATACCTTTTTTCTCAAGTATAAGATTGGCAACCATTGcttcaagaaaagaatttattgaCCTTGAGAAGTGGCTGAGTAGCAATTTAGCTACGTACAAGGATGCCTTCTTTGAGGAGTGCCTCAGGTTCTTAAAAGATGTCCATTTGGGTGGATCACAGAACCTATCTGGCAAACCTTTACATTGGTCTGGTGGTCTTTTGAATGTTGATGTTGAGACAAAAGCTACCTTCTTTAAGGTTCTTAAAGCTCATGCTGGCATGGTTACCTCTAACCATTTTTCTGAGGAGCTGGAAAGGTTGAATATATCCATTATGGACTCAAATCCAAGGTTGCAAAATGGTGGCACCACTGATTCATCAACTTCTGATGTACATGTTGATGACATTGAGGCTGAAGCAAATTCCCATTTTCATCAAATGTTTTCGGGTCAGTTAGGGGTTGATTCAATGGTTCAAATGCTAGTTCGATTCAAGGAGTCTTCTGTGAACAGGGAGAAGTCAATTTTTGATTGCATGATTGCAAATTTGTTTGAGGAGTACAAGTTTTTCCCAAAGTACCCTGACAGGCAACTCAGAATTGCTGCAGTGCTCTTTGGTTCTGTAATCAAGCATCAGCTTGTAACGCATCTATCACTTGGGATTGCTCTTCGTTGTGTTCTTGACGCTCTACGCAAGCCTGTAGATTCAAAGATGTTTTTGTTTGGAAGTCTAGCATTGGAGCAGTTTGTTGATCGTCTTATTGAATGGCCCCAGTATTGCAATCATATTCTGCAAATCTCTCATTTGCGGAATACTCATTCAAATATAGTTGCATTCATTGAACAAGCGCTTGCCAGGATTTCATCAGGTCATACAGACCTAGATGGGTTCAATTATTCTTCTGCCATCAATAACCATAATACTGCTCAGGTGACCTCAGGGAATGTGGAGCTGTTCAATGGCTCTAGTGTCACACAAACTGGACAGCAACTTCCTTCTCTGCAAGTTCAACAGAGACATGAAGTTTCCCTTGAAGATCGTCATAAAGCTTTGGCTGGTTCATCTAATGATATAAAACTGCTCTTATCTTCTGTGGGGCAATCTTCAATAGTTACACCTAGTGATACTTCTAGTACTAATAAGGTACATAACACAGTTAGTGCTACGTCAATGCTGTCTTCATCCCCTGGTTTTGTTCGGCCCACCCGCACAACTCCTTCTGCcaGGTTTGGTTCAGCTTTAAACATAGAGACTCTGGTTGCTGCTGCTGAGAAAAGAGACACTCCTATTGAGGCTCCAGAATCAGAGGTTCAAGACAAGatatcatttataattaataatatatctgCTACAAATGTTGAAGccaaagcaaaaaattttactGAAATATTGGAACAGCGATACTATCCTTGGTTTGCACAATACATGGTGATGAAAAGAGCAAGCATTGAGCCTAACTTCCATGACTTATACCTGAAGTTCCTCGACAAAGTCAATTCAAAGTCtttaaataaagagattaTCCAGGCAACATACGAGAACTGCAAGGTTCTTCTAGGATCAGAGCTCATTAAGTCAAGTTCAGAAGAACGTTCTTTGCTAAAAAATCTGGGGAGCTGGTTAGGAAGGCTAACTATTGGCAGGAATCAGGTTTTGAGGGCTCGTGAAATAGATCCAAAATCTTTGATTATTGAGGCATATGAGAAAGGACTGATGATTGCTGTGATTCCTTTTACTTCAAAGATCCTGGAACCTTGCCAAAGCAGTCTTGCATATCAACCTCCTAACCCTTGGACCATGGGTATTCTGGGATTGCTCGTTGAGATATATTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTCTATTCAAAAATCTTGGTGTAGATATGAAGGATGTCACACCAACTTCTCTTCTGAAGGATCGGAAGagagaaattgaaggaaatCCGGATTTCTCTAATAAAGATGTAGGGGCTACAAAAACACAAATGATGGCTGATATTAAATCTGGTCTTGTGCCTACGGTAAATCAAGTCGAAATGCCACTTGAAGTTGCCAATCCATCAAATACTGGGGGTCATACGCATTTGCTTCCTCAGTATGCTTCTCCTCTTCATCTTTCTACGGGAGCATTGATGGAAGAGGAGAAGGTGGCTGCCATAGGTCTGTCTGATCAGCTTCCCTCTGCCCAAGGACCGTTGCAAGCAACTCCTTCGTCAGTGCCTTATTCTATTAGCCAGGGTCCAACAGCCATACCTAATATTGGGACACATGTTGTTATTAATCAAAAGCTCAGTGGTTATGGGTTGCAAATGCATTTTCAGAGAGTGGTCCCTATTGCAATGGATAGAGCCATCAAAGAGATAGTGTCTGGTATTGTGCAGCGCAGTGTTTCCATAGCAACACAAACGACAAAGGAACTTGTTTTAAAGGATTATGCCATGGAATCAGATGAGACACGTATACTAAATGCTGCGCACTTGATGGTTGCTAGCCTGGCAGGCAGTCTTGCTCATGTCACATGCAAGGAACCTTTGCGTGCATCAATATCAAGTCAACTGAGGACTTCACTTCAGAATCTAACTATTGCAAATGAAATCCTCGAGCAAGCAGTACAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAACAGGCTGCTACTGATAAGGCAATAAACACCATTGATACAGAGATAGGTCAACAGCTTGCTTTGAGAAGGAAGCATCGAGACGGTATGGGTCCCACATTTTTTGATGCAAACTTGTATTCCCAAGGTTCTATGGGTGGTGTGCCAGAGCCCCTTCGCCCAAAACCTGGTCAGTTGACCCTCTCACAACAGCGTGTCTATGAGGACTTTGTTCGGCTTCCTTGGCAAAACCAGTCTAGCCAGAGCTCTCATTCTATGCCTGCTGGTGTCACTGTTCAATCTAGCAATTCTGGTCTCACTGGCACCTATGGTTCTGCATTTGGAAATATCAATCCTAGTTACTCAGTTAGCCCTGGAAGTGCTGGATATGAAGCAGTTTCTCGATCATCTGTTGATACAGCGGACTCTAATTTGGCTCCACATTTTagTGGTTCTGCAATTCACGTTAGAGCACCTGACAGTCTTTCCCAGCATAGTCTGGAGAGTGATTCTGTTGCTGCCTCATTTCCTTCAGCTGCTTCCACCCCTGAGTTACATCCATTAGATCATTCTGATTCTGTTCaaGAAACTGGAGCTTCTTCACAGCCACTAGCTTCACCAGTTGCCAACATTGGAAGCAGCATCTCTGAGGCATCTCTTACTACAAGGGATGCCCTGGATAAATACCAAATTGTTGCACAAAAGTTGGAAGCTTTGGTGAACAGTGAGTCTAGGGAAGCAGAAATTCAGGGAGTGATTTCTGAGGTTCCTGACATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCAGTGGCTCAAAAGGTTTACAAAGGTTTATATGATAATGCTTCAAACAACGTTCACGTGGGTGCTCATCTTACTATCCTGACTGCTATTCGTGATGTTTGCAAGCTTGCAGTGAAGGAGCTCACTAGTTGGGTAATATActcagaagaagaaaggaagtttAACAAGGACATTACCATTGGTCTTATTCGCAGTGAATTACTTAATCTTGCTGAATACAATGTTCACATGGCAAAACTTATTGACGGGGGAAGAAACAAGGCTGCTATGGagttttctatttctcttcttcaaacCTTGGTTATTGAGGAACCTAAGGTTATCTCAGAACTTCACAATCTAGTTGATGCTTTATCAAAGCTTGCCACAAAGCCTGGATCCCCTGAATCTTTACAACAGCTGGTTGAGATGGTCAAGAATCCTACAGCTAATGCTTCTCTATCTGTCACCAGTGCTGCAAAGGAGGATAAAACCAGGCAACCAAGAGACAAAAAGGGTCCTAGTCTGCTTGCTGCTAATAGAGAGGAGTTTAATGGCATGGAGTCCGTTGAACCAGATCCTGCTGGATTCCGAGAGCAGGTTTCCATGTTCTTCACCGAATGGTACAAAATATGTGAACTCCCTGGTGCCAATGATGCTGCTTGTGCACATTTCATTTTGCAGTTACATCAGAATGGTTTGCTTAAGGGAGATGATATGACTGATCGCTTTTTTCGGCTTTTGATGgACCTAGCTGTGAACCATTGTCTATCCTCAGAGGTGATTAATGCAGGGGCCCTGCAACCTCCCCAACAAATGTCATTTCTTGCCATTGATATTTATGCCAAACTTGTCTTTTCGATTCTAAAGGGATCAAACAAGCTGATTCTTCTTCCCAAGATTCTGGCTGTGACTGTAAGATTCATCCAGAAAGATGCGGAGAAGGATGTGTCGTTTAATCCAAGGCCATTTTTCAGATTGCTCATTAACTGGCTTCTAGACCTTGGTTCACTTGAGCCTGTTTCAGATGGTGCAAATCTTCAGATTTTGACTGCTTTTGCAAATGCATTTCATGCTTTGCAGCCCCTCAAGGTTCCTGCATTCAGCTTTGCATGGCTTGAGTTGATAAGTCATAGGAGTTTCATGCCAAAAATGCTGACCGGTAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATCTCTTCCAATTCATGGAACCTTTTTTGAGGCACGCTGAACTTGGAGTGCCGGTTCATTTTCTCTATAAGGGCACACTCAGGGTTCTCCTAGTGCTACTTCATGATTTTCCAGAGTTCCTATGTGATTATCATTTCACCTTCTGTGATGTTATCCCTCCAAGTTGCATACAGATGCGAAATATCATTCTTAGTGCATTTCCTCGTAGTATGAGGCTGCCAGATCCATCAACGCCTAATTTGAAGATCGACTTGCTTCAAGAGATAACTCAATCTCCTCGCATTCTTTCTGAGGTTGATGCTGCACTTAAAGTAAAGCAGATGAAGGTGGATGTTGATGAATATCTCAAGACGAGGCAGCAGGGTTCTCCATTTCTGTCTGAATTGAAGCAGAAGCTGCTGCTCTCACCCAATGAAGCTGCCTCTGCTGGGACCCGTTACAATGTACCATTGATCAACTCACTTGTGCTGTATGTTGGGATGCAGGCGATCCAGCAATTGCAGGGACGAACTCCCCATGCTCAATCAGCTGCAAACGCCTTTCCGTTGGCTGTATTTTCCGTTGGTGCTGCACTGGATATTTTTCAGACCCTAATTGTGGACTTGGACACCGAGGGGCGCTACCTTTTCCTAAATGCTGTTGCCAACCAACTACGCTACCCAAATACACATACACACTACTTTTCCTTCATCCTTCTCTATTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATCACAAGGGTTTTGTTAGAACGTTTAATTGTAAATCGACCTCATCCTTGGGGCCTCCTTATTACGTTCATTGAGCTGATCAAGaATCCTAGGTATAATTTCTGGAACAGATCCTTCATAAGATGTGCACCGGAGATTGAAAAGCTTTTTGAATCAGTTTCAAGATCTTGTGGGGGTCCAAAACCAGTGGATGAGAGTATGGTATCGGGTTGGGTTTCAGATGGTCCACATTG 7223 0.4149 MTNFSSTASNQIRFLLESLNEVNFDSIFQELCRFAEYGTDGSILLLQTCLDHLNLFRIDLKDIVQEPILGAVIRYLLDKPNFSTVFTESLKDAEISEGFLESFSNGLQLSLLEKIAISLALSDSENLETRLCGKNFCLTQIEELCTNPSSLSCSEQIQHIIMFLKRSEGLSKHVDSFMQMISLVQPKDAQPFVLIPLLSDEIRETNFLRDMELFHECGDNDFDAILADIQKEMNMGDIVKELGYECTVSVSQCKEIFSLFLPLTENTIAKLLGAIARTHMGLEDNQSLFLTFGMALGLSTLSELPPLNSWNIDVLIDTIKHLAPGTNWVRVIENLDHEGFFLPNEEAFSFLMAVYRHACQEQFPLHAICGSVWKNAEGQLSFLKYAVSAPPEVFTFAHSVRQLAYMDAINGHKLQRGDANHAWLCLDLLDVLCQLAEWGYASTVRSILDYPLKHCPEILLLGMAHVNTVYNLLQHEVSLIAFPMIVKGAVGSGVIGYLWNVNPNLVLRGVIDSQNNDLDCITRILDIFQELKILLSVLEMIPFFSSIRLATIASRKEFIDLEKWLSSNLATYKDAFFEECLRFLKDVHLGGSQNLSGKPLHWSGGLLNVDVETKATFFKVLKAHAGMVTSNHFSEELERLNISIMDSNPRLQNGGTTDSSTSDVHVDDIEAEANSHFHQMFSGQLGVDSMVQMLVRFKESSVNREKSIFDCMIANLFEEYKFFPKYPDRQLRIAAVLFGSVIKHQLVTHLSLGIALRCVLDALRKPVDSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRNTHSNIVAFIEQALARISSGHTDLDGFNYSSAINNHNTAQVTSGNVELFNGSSVTQTGQQLPSLQVQQRHEVSLEDRHKALAGSSNDIKLLLSSVGQSSIVTPSDTSSTNKVHNTVSATSMLSSSPGFVRPTRTTPSARFGSALNIETLVAAAEKRDTPIEAPESEVQDKISFIINNISATNVEAKAKNFTEILEQRYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKSLNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGRLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLVEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGATKTQMMADIKSGLVPTVNQVEMPLEVANPSNTGGHTHLLPQYASPLHLSTGALMEEEKVAAIGLSDQLPSAQGPLQATPSSVPYSISQGPTAIPNIGTHVVINQKLSGYGLQMHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISSQLRTSLQNLTIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLALRRKHRDGMGPTFFDANLYSQGSMGGVPEPLRPKPGQLTLSQQRVYEDFVRLPWQNQSSQSSHSMPAGVTVQSSNSGLTGTYGSAFGNINPSYSVSPGSAGYEAVSRSSVDTADSNLAPHFSGSAIHVRAPDSLSQHSLESDSVAASFPSAASTPELHPLDHSDSVQETGASSQPLASPVANIGSSISEASLTTRDALDKYQIVAQKLEALVNSESREAEIQGVISEVPDIILRCVSRDEAALAVAQKVYKGLYDNASNNVHVGAHLTILTAIRDVCKLAVKELTSWVIYSEEERKFNKDITIGLIRSELLNLAEYNVHMAKLIDGGRNKAAMEFSISLLQTLVIEEPKVISELHNLVDALSKLATKPGSPESLQQLVEMVKNPTANASLSVTSAAKEDKTRQPRDKKGPSLLAANREEFNGMESVEPDPAGFREQVSMFFTEWYKICELPGANDAACAHFILQLHQNGLLKGDDMTDRFFRLLMDLAVNHCLSSEVINAGALQPPQQMSFLAIDIYAKLVFSILKGSNKLILLPKILAVTVRFIQKDAEKDVSFNPRPFFRLLINWLLDLGSLEPVSDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGVPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKVKQMKVDVDEYLKTRQQGSPFLSELKQKLLLSPNEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWVSDGPH 2407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01630 2407 Gene3D - 1867 2152 - -
Bva02g01630 2407 Gene3D - 2153 2382 - -
Bva02g01630 2407 MobiDBLite consensus disorder prediction 1583 1623 - -
Bva02g01630 2407 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 6 2407 IPR040398 GO:0017148|GO:0030015
Bva02g01630 2407 MobiDBLite consensus disorder prediction 1843 1858 - -
Bva02g01630 2407 Gene3D - 655 822 IPR038535 -
Bva02g01630 2407 Coils Coil 1643 1663 - -
Bva02g01630 2407 Pfam CCR4-Not complex component, Not1 2015 2383 IPR007196 -
Bva02g01630 2407 Gene3D - 935 1185 - -
Bva02g01630 2407 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 649 819 IPR032193 -
Bva02g01630 2407 Coils Coil 1395 1415 - -
Bva02g01630 2407 MobiDBLite consensus disorder prediction 1837 1873 - -
Bva02g01630 2407 PANTHER BNACNNG58980D PROTEIN 6 2407 - -
Bva02g01630 2407 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1309 1451 IPR024557 -
Bva02g01630 2407 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 482 621 IPR032194 -
Bva02g01630 2407 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 963 1183 IPR032191 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01630 Bva-Chr2 19013033 19039358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01630 K12604 - gmx:100783935 3896.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01630 02 19013033 19039358 Bva02g01630 02 19013033 19039358 ECH