Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01558 ATGAGGCTAAGTAGTATTAGCATTAGACAAGCTTCTCCTAATTGCAGTTCGGCTTCAACACCTAACCCTCTGTCGCACCAACATTCCAGCATTTCAACTTGTTCTAACTCTCTTCAACTCAAATCCACCACCACCGGCTTAGCATTCAACAAGTCTCAGCTCTCGTGGAATCGTCTGGTACCAGCTTCTGGGCAATGCAAGCTCGGCCACAAATGGATGCAATACCAAGGAATCGACAACTGGGAAGGCCTGCTTGACCCTCTAGACCATAACCTGCGCCTTGAGATCCTAAGATATGGCCAGTTTGTCCAGGTTGCTTATCAATCCTTTGACTTTGATGTCTCCTCCCCCACCTACGCCACCTGCCGCTATCCTAAAGGTTCCATCTTTGCCCGCTCCGGCTTGGCAAACTCCGGCTACCGGATTACCAAGAATCTACGTGCCACCTGTGGGGTCGGCTTACCCAGGTGGATGCACGGAATGCCCAAGTGGATCTCCACGCAGTCTAGCTGGATTGGTTACGTGGCCGTTTGTCAGGAAAAAGAGGAGATTTTACGGCTTGGTAGGCGTGACGTGGTGATTGCTTTACGGGGAACAGCCACGTGCTTGGAGTGGTTGGAAAATCTACGCGCCGCCTTAACGAACTTACCGGCTCATATGAGGGGTGAAAGTGAAGGTACCGGGAATTCCATGGTGGAGAATGGGTTTTTGAGTCTTTACACGTCTAAAACGGCGACGTCTCCAAGTTTGCAGGAGATGGTGAGGGAAGAGGTCGGGAGAATATTACAATCCTACGGCCACGAGCCACTTAGCTTGACCATCACTGGGCATAGTCTGGGAGCCGCACTCGCCACCCTCATCGCGCACGACATAGCCACCGCTTTCAAGGGCGCAGCGCCAATGGTCACTGTGGTTTCCTTCGGTGGGCCGCGCGTGGGGAACGAGGCGTTTAGAACACAGTTGGAAAAGAGTGGGACCAAGATTTTAAGAATCGTGAACTCCGACGATGTAATTACGAAAGTGCCAGGCCTCGTTGTCAGGAACGATGAGGTGGAAGAATGTAGAGATGTCCAGATGGCAAAGGTTCTGAGGTGGCTCCATAAGCGCATGGAGGACATGCAGTGGGTCTATGCTGACGTGGGACAGGAGTTGAGGTTGAGCAGCAGGGAGTCTCCGTACCACAAGAAGGGAGATGTTGCCACGTGTCATGATCTGAAGACGTATCTAGACTTGGTAAATGGTTTCGTAAGCTCCGCGTGCCCTTACACTTGCAAAACGAAGCCATTAATCCAGCAGAAGCCTGGCTTTGATGATTCCCTCTatcttgtttg 1331 0.5139 MRLSSISIRQASPNCSSASTPNPLSHQHSSISTCSNSLQLKSTTTGLAFNKSQLSWNRLVPASGQCKLGHKWMQYQGIDNWEGLLDPLDHNLRLEILRYGQFVQVAYQSFDFDVSSPTYATCRYPKGSIFARSGLANSGYRITKNLRATCGVGLPRWMHGMPKWISTQSSWIGYVAVCQEKEEILRLGRRDVVIALRGTATCLEWLENLRAALTNLPAHMRGESEGTGNSMVENGFLSLYTSKTATSPSLQEMVREEVGRILQSYGHEPLSLTITGHSLGAALATLIAHDIATAFKGAAPMVTVVSFGGPRVGNEAFRTQLEKSGTKILRIVNSDDVITKVPGLVVRNDEVEECRDVQMAKVLRWLHKRMEDMQWVYADVGQELRLSSRESPYHKKGDVATCHDLKTYLDLVNGFVSSACPYTCKTKPLIQQKPGFDDSLYLV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01558 443 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 39 432 - -
Bva02g01558 443 CDD Lipase_3 135 350 - -
Bva02g01558 443 SUPERFAMILY alpha/beta-Hydrolases 139 391 IPR029058 -
Bva02g01558 443 Gene3D alpha/beta hydrolase 71 433 IPR029058 -
Bva02g01558 443 MobiDBLite consensus disorder prediction 1 28 - -
Bva02g01558 443 Pfam Lipase (class 3) 193 344 IPR002921 GO:0006629
Bva02g01558 443 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 39 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01558 Bva-Chr2 18505726 18506841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01558 62 422 Acyl Lipid Metabolism Gene Families AT2G44810 66.391 1.50e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01558 K16818 - gmx:100817820 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01558 02 18505726 18506841 Bva01g00637 01 4684543 4685880 BWGD
Bva02g01558 02 18505726 18506841 Bva02g01558 02 18505726 18506841 ECH