Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01548 ATGGCTCGATTCCtggttttccttttgttgctAAACCTGATGGCAGGATTCAGCACACTACCAGCAGCTGTGTATGGTGACACAGTCCCTGTTCTCAGCATTGACGGTGGTGGTATAAAGGGCATTATCCCAGCAGTCATTCTTGAATACCTAGAATCTGCCATTCAGAAAGTGTCGAATGACAAGAATGCTAGGGTAGCAGACTATTATGATGTGGTAGCTGGGACAAGCGCAGGTGGCCTTATGACTGCTATGCTTACTGCCCCTAATCCAAATAACCCAAAGCGTCCACTGTTTACGGCCAAGGAAATTGTGGAGTTCTACAAGAAAGAATGCCCTCATATTTTCAATGGAAGTGAAATAACTATGCAtgcaactttgatgattcagACGAAGAAATCCCCTGAATTAAATGCCCTACTTTCAGACATAGCCATAAGCACTTCAGCTGCACCAACATATCTTCCATCCTATAATTTCAAGAATGGAGACGCTGAATTCAATATGATCGATGGTGCTGCGTTCGCAGATAATCCGGCATTTGTTGCTTTAGATGAAGTTCTACAAAGTCAACAAGGGAAGAAGGATACCAAATTCCTGCTGCTATCTATAGGGACTGGAATTCAAGAAACCAAGGGGTGGAATGCCACCGAGGCAAAAAGATGGAGTGCAAAGTTGGATACGTTGGATGAAGCTAAAGATGAAATCTTGGAAAGTCTTGAAATAGCAGGAAAGCAGCTCTTAAAAGAAGCAGCTAAAAGGATGAATACCATTACCTTTGAACCTGAGAACATAAATATTACCAATGCTGAGGCTCTCGATAGGTTGGCTGAAACCCTGTATAAGTTGAAGCAGCAACGTTTGGGAAAGATATCATCACTGGAAATGAAGAAGTCTCAGAAAATTCTGAAGAAGAAGGCTACGTGGTTTGCCTTTATGTG 941 0.4102 MARFLVFLLLLNLMAGFSTLPAAVYGDTVPVLSIDGGGIKGIIPAVILEYLESAIQKVSNDKNARVADYYDVVAGTSAGGLMTAMLTAPNPNNPKRPLFTAKEIVEFYKKECPHIFNGSEITMHATLMIQTKKSPELNALLSDIAISTSAAPTYLPSYNFKNGDAEFNMIDGAAFADNPAFVALDEVLQSQQGKKDTKFLLLSIGTGIQETKGWNATEAKRWSAKLDTLDEAKDEILESLEIAGKQLLKEAAKRMNTITFEPENINITNAEALDRLAETLYKLKQQRLGKISSLEMKKSQKILKKKATWFAFM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01548 313 Gene3D Cytosolic phospholipase A2 catalytic domain 126 292 - -
Bva02g01548 313 Gene3D Cytosolic phospholipase A2 catalytic domain 22 125 - -
Bva02g01548 313 PANTHER XYLOSE ISOMERASE 3 122 - -
Bva02g01548 313 PANTHER XYLOSE ISOMERASE 130 224 - -
Bva02g01548 313 PANTHER XYLOSE ISOMERASE 225 292 - -
Bva02g01548 313 PANTHER PATATIN 3 122 - -
Bva02g01548 313 PANTHER PATATIN 130 224 - -
Bva02g01548 313 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 184 IPR002641 GO:0006629
Bva02g01548 313 PANTHER PATATIN 225 292 - -
Bva02g01548 313 SUPERFAMILY FabD/lysophospholipase-like 31 286 IPR016035 -
Bva02g01548 313 Pfam Patatin-like phospholipase 32 94 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01548 Bva-Chr2 18441256 18443968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01548 18 292 Miscellaneous Gene Families AT2G26560 35.196 6.06e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01548 - - gmx:100802114 215.698