Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01546 ATGGCTGGATTCTTTACTTTCCTCTTTTTGCTTAACCTAATGGCTGTATTCAACATAGAGCTACCATCGGTGGCCTATGGAGATATAGTTACCATTCTCAGCATTGATGGAGGTGGTGTGAAGGGAATTATCCCAGCTGTAGTTCTTCAACACCTTGAGGAATCCCTTCAgAAAGTGTCCGGTGACAGTAATGCTAGGATAACAGATTATTTTGATGTGGTAGCTGGAACAAGCACAGGTGGCCTTATGACTGCCATGCTCACTGCCCCTGACCCAGAAAATGCTGGTCGTCCTCTATTTACACCCGAGGGAATCAAAGAATTCTACAAGAAAGAATGCCCttatattttctatgaaaGTTTTTGGACCGATATTTCTCCCAGTCCGAAGTATGATGGCGTGTATCTGCATAACATAACACGCGACTTGCTGAAAGAAACACGTTTGGAGGAGACATTGACTAACGTTGTAATCCCAACCTTCGACATGGAGCTGCTCGAGCCAGTGATGTTCTCAAGTTTCAAGACGAAGAAATCCCCCGATTTAAATGCCCTACTTTCAGACATAGTCCTCAGCACTTCAGCCGCACCAACATATCTTCCACCATATTATTTCAAGAACGGAGACACTGAATTCAATATGATCGATGGTGCTGCGGTCGCTGCTAGTCCGGCTCTGGTTGCTATTACTGAGGTGGCTGAAGAAGTGGAGGATAGCCAATTCCTGATGCTGTCTTTAGGAACTGGGGTTCAAAAGCATACAGGGGCGAAGGCCATCATAGCAAGTGATTGGAGTTATTTATACTGGGCTTATTATCTGAAAAATTTCACTAGTTATGACATGGTTAACTATTACGTTACCAAGGTTTTCCAAGCCCAACAGACCCCAGAAAATTACCTTCGAATTGAGGAATATAACTTACCCAAGGATAATGATTCGTTGGATAATTCAACCAAAGCAAACTTGGATGCTCTTGAAGAGATAGGAAGCAATCTGTTGAATGAACCAGCTGTCCCCAATAACATACATCCAGGTACAAATGCTGAAGCTCTCGACAGGCTGGCTGTACGTCTTTATGAGATTAAGCAGCAACGTTTGGCTAAGAGATCACTGGGAAGGAAAGGATCCAGAAAAGTTATAAAAGAGATGGCTTCGTGGTTTGCCTG 1166 0.4322 MAGFFTFLFLLNLMAVFNIELPSVAYGDIVTILSIDGGGVKGIIPAVVLQHLEESLQKVSGDSNARITDYFDVVAGTSTGGLMTAMLTAPDPENAGRPLFTPEGIKEFYKKECPYIFYESFWTDISPSPKYDGVYLHNITRDLLKETRLEETLTNVVIPTFDMELLEPVMFSSFKTKKSPDLNALLSDIVLSTSAAPTYLPPYYFKNGDTEFNMIDGAAVAASPALVAITEVAEEVEDSQFLMLSLGTGVQKHTGAKAIIASDWSYLYWAYYLKNFTSYDMVNYYVTKVFQAQQTPENYLRIEEYNLPKDNDSLDNSTKANLDALEEIGSNLLNEPAVPNNIHPGTNAEALDRLAVRLYEIKQQRLAKRSLGRKGSRKVIKEMASWFA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01546 388 SUPERFAMILY FabD/lysophospholipase-like 29 342 IPR016035 -
Bva02g01546 388 PANTHER PATATIN 5 374 - -
Bva02g01546 388 Gene3D Cytosolic phospholipase A2 catalytic domain 23 371 - -
Bva02g01546 388 Pfam Patatin-like phospholipase 33 229 IPR002641 GO:0006629
Bva02g01546 388 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 229 IPR002641 GO:0006629
Bva02g01546 388 PANTHER XYLOSE ISOMERASE 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01546 Bva-Chr2 18412865 18415718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01546 26 365 Miscellaneous Gene Families AT2G26560 44.416 2.05e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01546 - - gmx:100802114 356.295