Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01537 ATGGAGGCGCTAAAATTGTGGAGTTTAACCTCGCACCCACTTAAGCACTTCTTCCACTTGGCCACTTCCTCTTCGAGCACTTCCACCTCTCACGCCATTCATCGAACACCTGGTAGGCTAGTCCTCCGCTGCTGCTCTTCCACTGCCACATCCAAAAATGTCGACCAAGGCAATGCCAGGGTCTCCGGTGGTGACCGGCGGTCCTCCTCGTCTTCAACTTCCGATAGAGACGCTGTTCGAGCCATTCGGTTAAAGAAGGTTGAAGAATTGAGAAGCAAGGGACTTAATCCATATGCTTATAACTGGGACAGGACTCACAGTGCTAACCAGCtgcaagatatatataaaaatttaggaaATGGTGAGGAATCCCATAGTGAGAATGATCATGTATGTATAGCTGGAAGAATTGTTGCGAGGAGGGCATTTGGAAAGCTGGCCTTTTTGACCCTAAGAGATGATTCCGGGACAATTCAGCTTTACTGTGATAAGGAGAGGCTCATAGGTGATCAGTTCGAGCGGTTAAAGGCAGTTGTTGATGTTGGTGATATACTAGGTGCAAGAGGTTCAATAAAGCGTACAGAAAAAGGAGAGCTTTCTGTTTGTGTGCATTCATTTGCGATTCTTACAAAATCTTTGCTTCCATTGCCTGATAAATATCATGGACTAACTGATGTAGATAAGCGCTATCATCAAAGGTATGTAGATATGATTGCAAGTCCTGAAGTAGCAGATGTATTTCGTAAAAGAGCAAAGATTGTATCAGAGATACGAAGGACAATGGACTCTCTTGGGTTTGTTGAAGTAGAAATGCCGGTTTTGCAGGGAGCAGCTGGCGGAGCAGAAGCGAGGCCATTTATTACATACCATAATTCTCTCGGAAGGGAACTATATTTGAGAATTGCAACTGAACTGCACCTGAAGAGAATGCTGGTGGAGGGTTTGAAAAAGTATACGAGATTGGCCGGATATTTAGAAATGAAGGAATTTCAACTCGTCATAATCCTGAATTTACCAaTATATGAAGCATATTCGGACTACCAAAGCATGATGAACATGGCAGAGGAGATTGTCACTCGATGTGCTCTTACTGTTCATGGGAAGCTTACCATTGATTACCAGGGAGTGGAGATATGCCTGGAGCGGCCCTGGAGAAGGGAGACAATGCACAGCCTTGTAAAAGAAGCTGCGGGGATTGATTTTAATGAGTTGGGAAATGATCTTCAGATTGCAAAGGAAGTTACTTTGAGTACCCTTGGAAAGAatcttgaaaagaaagataaagctTCCGTTGAAGCATGCCAATCCATTGGCCACCTACTTAATGAGGTTTTTGAGATTGTTGTAGAACCAATGCTCATACAACCTACTTTTGTTCTAGACTATCCAATTGAAGTATCTCCGCTGGCTAAACCACACCGAAGATATACAGGTATGACTGAGAGGTTTGAACTATTCATCTGTGGTCGTGAGCTGGCCAATGCATTCTCTGAATTGACTGATCCTATTGATCAGGATCAAATTAGACAGCATGAAAAGCAGAAAGCGGCTGCTATTTCAAATGCACGTGATAAGGAAGGAATGGAAAATGAGGATGACTCATATGAAGTTACTCTGGATGATGACTTTCTGACAGCTTTGGAATACGGAATGCCTTCAGCTTCTGGACTGgggATTGGAATTGATAGGCTTGTGATGTTTTTGACGAACTCTCCAAGTATAAGGGATGTGATTGCCTTCCCAGTACTTAAACTACAACAATGGTGGCAGGAAAGGGGTGTGTTTGTATGGGGGAAAGGAGTGCGGGAGAGGTGCACATGGAAAGTCCTGGTTTG 1835 0.4289 MEALKLWSLTSHPLKHFFHLATSSSSTSTSHAIHRTPGRLVLRCCSSTATSKNVDQGNARVSGGDRRSSSSSTSDRDAVRAIRLKKVEELRSKGLNPYAYNWDRTHSANQLQDIYKNLGNGEESHSENDHVCIAGRIVARRAFGKLAFLTLRDDSGTIQLYCDKERLIGDQFERLKAVVDVGDILGARGSIKRTEKGELSVCVHSFAILTKSLLPLPDKYHGLTDVDKRYHQRYVDMIASPEVADVFRKRAKIVSEIRRTMDSLGFVEVEMPVLQGAAGGAEARPFITYHNSLGRELYLRIATELHLKRMLVEGLKKYTRLAGYLEMKEFQLVIILNLPIYEAYSDYQSMMNMAEEIVTRCALTVHGKLTIDYQGVEICLERPWRRETMHSLVKEAAGIDFNELGNDLQIAKEVTLSTLGKNLEKKDKASVEACQSIGHLLNEVFEIVVEPMLIQPTFVLDYPIEVSPLAKPHRRYTGMTERFELFICGRELANAFSELTDPIDQDQIRQHEKQKAAAISNARDKEGMENEDDSYEVTLDDDFLTALEYGMPSASGLGIGIDRLVMFLTNSPSIRDVIAFPVLKLQQWWQERGVFVWGKGVRERCTWKVLV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01537 611 PRINTS Lysyl-tRNA synthetase signature 307 320 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bva02g01537 611 PRINTS Lysyl-tRNA synthetase signature 262 272 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bva02g01537 611 PRINTS Lysyl-tRNA synthetase signature 455 471 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bva02g01537 611 PRINTS Lysyl-tRNA synthetase signature 278 294 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bva02g01537 611 MobiDBLite consensus disorder prediction 51 69 - -
Bva02g01537 611 Gene3D Bira Bifunctional Protein; Domain 2 219 323 IPR045864 -
Bva02g01537 611 Gene3D Bira Bifunctional Protein; Domain 2 326 594 IPR045864 -
Bva02g01537 611 Pfam OB-fold nucleic acid binding domain 131 206 IPR004365 GO:0003676
Bva02g01537 611 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 247 581 IPR006195 -
Bva02g01537 611 MobiDBLite consensus disorder prediction 51 77 - -
Bva02g01537 611 Pfam tRNA synthetases class II (D, K and N) 226 583 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva02g01537 611 SUPERFAMILY Nucleic acid-binding proteins 76 218 IPR012340 -
Bva02g01537 611 CDD LysRS_N 130 237 IPR044136 GO:0000166
Bva02g01537 611 PANTHER LYSINE--TRNA LIGASE 65 587 - -
Bva02g01537 611 PANTHER LYSYL-TRNA SYNTHETASE 65 587 - -
Bva02g01537 611 Hamap Lysine--tRNA ligase [lysS]. 82 586 IPR002313 GO:0004824|GO:0005524|GO:0006430
Bva02g01537 611 Gene3D - 77 217 IPR012340 -
Bva02g01537 611 SUPERFAMILY Class II aaRS and biotin synthetases 225 583 IPR045864 -
Bva02g01537 611 TIGRFAM lysS_bact: lysine--tRNA ligase 81 585 IPR002313 GO:0004824|GO:0005524|GO:0006430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01537 Bva-Chr2 18334527 18341015 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01537 K04567 - gmx:100787720 887.486