Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01513 ATGGACAATCCAAAGCAATCGGTTGGAAGTTTCGCAATCTTATTCCTATTCTTCGCAGGGCTTGTTTTCCTCTACAATTGGTCATCTTACGCCAGCCCATTAGTTTCAATCCAGAAATCCATTTGCAACTCAGAAAATCCAACGACCATTGGCGTGTCTGAAGATGAGCTTGGCTCTATTTTGGCCAAAGCCTCAACGAGAAACAAAACAGTCATAATCACAATCGTAAACAAGGCATATACAGACCAAGATATCAATGAGGACAGCACCATGCTTGACCTTTTCCTCAACAGCTTCTGGTTAGGGGAAGGCACGAGATCTCTGCTTGATAACCTTCTGATAGTGGCGGTTGACCAGACGGCCTACGACAGGTGCCGGTTTCTCCGGTTAAACTGCTTCAGATTGGAAAGCGACGGCGTTGATTTCGAAAGAGAGAAAGTTTACATGTCTCAAGAGTTCATCACGATGATGTGGAGAAGGACAAATTTTCTCTTAGAAGTTCTGAAACGCGGCTACAATTTCATCTTCACGgaCACCGATGTAATGTGGCTGAGAAAtccttttgaaaaattgagcAGTAACGAGACCGAGGACATTCAAATAAGCACAGACAAGTACCTTCACAATCCATGGTCAGAAAAAAATCCCATCAACACCGGATTCTACTTCGTCCGGTCAAACAACAAGACCATCTCCTTATTCGAAACATGGTACGGCAAGAAGAACAGCACAGCAGGACAGAAAGAGCAAGATGTTTTACAGGACCTCATAAGAGATGGCATATTTGGACAACTGGGACTTAAGGTAAGGTTCTTGGACACCTTGTATTTCAGTGGCTTTTGCCAAGATAGTAGGGACTTTGGAGCAGTCACCACCGTCCATGCCAACTGTTGCCGGCATATCACCGCCAAAGTGGCTGATCTCAAGGTGGTCCTCGGTGATTGGAAGCAGTACAGAAAATTCGAATCCGATAAGAGGTTGAATGCTAATTTGACGATGAATATCCAGTGGAGCGGCCATTTTGGGTGTTGGAATTCATGGAAGAGGCTCACCGACACTCAGAAAGCTGAGCGTGAGCCATTTGAACAGAACAAATccataaagaagaaaaagACTGTAGCTTATACTGAACCAGTGCGCATTCCCGCCAACATTAccaatttattgttttatccAGCTTCAGTTCATTCGTGTTTAATGGATCCATCATTACTCTTTAACCAGCTCAAGGGAGCAGATCCGTTTTTCCTGCTTGCGGGTCCAAATGTGATTGAATCAGAGGAGCACATTCTGCGAATGGCGAAGCACATAAAGAGTATCTCATCTAAATTTGGATTGCCACTAGTTTTCAAGTCAAGCTTTGATAAAGCTAACCGGACATCATCTAAATCATTCCGTGGCCCAGGCATGACTGAGGGATTGAAGATACTTGAGAAGGTTAAAATAGCCTATGACATCCCTGTAGTGACAGATGTTCATGAGACTATCCAGTGTGAACCTGTGGGCAGAGTTGCAGATATTATTCAGATTCCAGCATTTTTATGTCGTCaaACAGACCTCTTAGTTGCAGCCGCTAAAACTGGGAAAATTGTCAACATAAAGAAAGGCCAGTTCTGTGCTCCTTCTGTCATGGCAAATTCAGCTGAAAAGGTCAGATTGGCTGGAAACCCAAATGTGATGGTTTGTGAGAGAGGAACTATGTTTGGTTACAATGATTTGATTGTTGATCCACGCAACCTTGAGTGGCTTAGAGAAGCCAATTGTCCTGTTGTAGCTGATGTCACACATGCACTACAACAGCCTGCTGGAAAAAAGTTGGATGGTGGAGGTGTTGCAAGTGGAGGTCTTCGAGAATTAATACCATGCATTGCAAGGACAGCAGTTGCTGTGGGCGTGGATGGGATTTTCATGGAGGTACACGATGATCCGCTGAATGCACCTGTTGATGGACCAACGCAGTGGCCTCTGCGTCATTTGGAGGAACTGCTGGAAGAGCTTGTAGCTATTTCTAGGGTAAGCAAGGGGAAGCAGCGATTCAACATTGATCTCACACCATTTCGTGAATA 2066 0.4356 MDNPKQSVGSFAILFLFFAGLVFLYNWSSYASPLVSIQKSICNSENPTTIGVSEDELGSILAKASTRNKTVIITIVNKAYTDQDINEDSTMLDLFLNSFWLGEGTRSLLDNLLIVAVDQTAYDRCRFLRLNCFRLESDGVDFEREKVYMSQEFITMMWRRTNFLLEVLKRGYNFIFTDTDVMWLRNPFEKLSSNETEDIQISTDKYLHNPWSEKNPINTGFYFVRSNNKTISLFETWYGKKNSTAGQKEQDVLQDLIRDGIFGQLGLKVRFLDTLYFSGFCQDSRDFGAVTTVHANCCRHITAKVADLKVVLGDWKQYRKFESDKRLNANLTMNIQWSGHFGCWNSWKRLTDTQKAEREPFEQNKSIKKKKTVAYTEPVRIPANITNLLFYPASVHSCLMDPSLLFNQLKGADPFFLLAGPNVIESEEHILRMAKHIKSISSKFGLPLVFKSSFDKANRTSSKSFRGPGMTEGLKILEKVKIAYDIPVVTDVHETIQCEPVGRVADIIQIPAFLCRQTDLLVAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHLEELLEELVAISRVSKGKQRFNIDLTPFRE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01513 688 Pfam Nucleotide-diphospho-sugar transferase 108 308 IPR005069 -
Bva02g01513 688 PANTHER - 1 349 - -
Bva02g01513 688 Pfam DAHP synthetase I family 409 664 IPR006218 GO:0009058
Bva02g01513 688 Hamap 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 409 676 IPR006269 GO:0005737|GO:0008676
Bva02g01513 688 Gene3D Aldolase class I 406 682 IPR013785 -
Bva02g01513 688 PANTHER EXPRESSED PROTEIN-RELATED 1 349 IPR044821 -
Bva02g01513 688 TIGRFAM KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 414 674 IPR006269 GO:0005737|GO:0008676
Bva02g01513 688 SUPERFAMILY Aldolase 410 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01513 Bva-Chr2 18204532 18213408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01513 K01627 - gmx:100809120 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01513 02 18204532 18213408 Bva02g01513 02 18204532 18213408 ECH