Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01228 ATGTGTGTTCTGTTCAGTGTGACGATCCAGGAGAACAGCAGCGAGACTCACGAATCCGCACATAAAGTTCAACCATCCTTGGAATTCAAATTCCCTGTTCGAGATTCAAATTCGTTCTACAGGATGTATGCTGATCGGGTGGAGGAGACTGGTACGAGGAGGTCAGTGAAGGAACGCCTTAATGAGAATTTTGTCGGCGGGCATCGGCAAATAACCGGAAAGAGGCAGAGGCAAGACGACAAGTGGGAACACGATCtctttgatgatgatgaaccCCGCATTTCTAATCGCAAAGTTAGTGCTCAAGATCTTCGTGTGAAGCTTCAAAGGAAAGCTCTTAAACCAGCAGCTCAGAGTGGAAAAAGTTCTCTTCCAGTGGCGCGGGATCTACATGAACGATTGTTAGGGAGAACAGCACCACAGTCTAAAACCTCTGATCCACCAAGGTCAAAAGTTGAGGTTGCTAAACCAAGCAATAAAAGTGCCATCATCGAGGCTCCTGCATCACTGACCAAAAGAACAGTTAATCCAGATCCCAAAAAGAAAGCCTCACAAAAGGTTGATACTTCAGTGGATGGATTTTTGCAGTCCTTGGGTCTTGACAAATATCTGATAAGTTTTCAAGCAGAAGAAGTTGATATGACAGCTCTCACGCACATGACTGATGATGATCTCAAGGCTCTGGGTATTCCAATGGGGCCAAGAAAGAAGATTCTTTTAGCATTGGAGTCAAAAGGCTG 740 0.4419 MCVLFSVTIQENSSETHESAHKVQPSLEFKFPVRDSNSFYRMYADRVEETGTRRSVKERLNENFVGGHRQITGKRQRQDDKWEHDLFDDDEPRISNRKVSAQDLRVKLQRKALKPAAQSGKSSLPVARDLHERLLGRTAPQSKTSDPPRSKVEVAKPSNKSAIIEAPASLTKRTVNPDPKKKASQKVDTSVDGFLQSLGLDKYLISFQAEEVDMTALTHMTDDDLKALGIPMGPRKKILLALESKG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01228 246 MobiDBLite consensus disorder prediction 72 88 - -
Bva02g01228 246 SMART SAM_4 183 246 IPR001660 GO:0005515
Bva02g01228 246 MobiDBLite consensus disorder prediction 136 162 - -
Bva02g01228 246 MobiDBLite consensus disorder prediction 67 88 - -
Bva02g01228 246 Pfam SAM domain (Sterile alpha motif) 189 243 IPR001660 GO:0005515
Bva02g01228 246 ProSiteProfiles SAM domain profile. 186 240 IPR001660 GO:0005515
Bva02g01228 246 SUPERFAMILY SAM/Pointed domain 188 243 IPR013761 -
Bva02g01228 246 CDD SAM_superfamily 190 243 - -
Bva02g01228 246 Gene3D - 188 246 IPR013761 -
Bva02g01228 246 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 41 151 - -
Bva02g01228 246 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 147 233 - -
Bva02g01228 246 PANTHER OSJNBA0060P14.15 PROTEIN 41 151 - -
Bva02g01228 246 PANTHER OSJNBA0060P14.15 PROTEIN 147 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01228 Bva-Chr2 16419283 16423511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01228 76 245 Glycosyltransferase AT3G07170 57.647 5.74e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01228 - - gmx:100527300 265.003