Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01183 ATGGGGAGGAAGAGGACTTCGCCTGCGAGCGTTTTGTTTGGATGGGTGAGGAAGCAATCTACGAAAGTGAAGATCTTTTTGGGGTTATTGCTTGTGCTTTTTGCTTTGGTGGCTTTGAAGTTTACGATTGATGACCACATGCATTATTTTCTTGCCTCCGACGCTGTTCATATTGTTGGGATTTTTGTGCTTTTGTACAAGCTCGTTACCCACAAGACATGCTCTGGTCTTTCACTGAAGACCCAAGAGCTCACAGCTTTATTCCTAGCTGTAAGATTAGTTTGTAGGGTCATGTTGCATGTTGACATCCATGTGTTCCTAGACCTTGTTTCTCTCTTAGCAACAATACTGGTTATATGCATGATGAGATTCAAGCTGAAGTCAACATACATCAAAGAGCTTGACAGCTTGAAACTATACTATGTGGTGGTTCCAGCTGCAATCTTTGCCATAGTAATCCACCCTCATAGTTTTTATTACTGGAGGGGAGTCATCTTCGCGTTCTGCTGCTATTTGGAAGCGGTTTCTGTGCTACCTCAGCTTCGTTTCATGCAGAACGCAAAGATGGTTGAAACCTTTACTTCACATTATGTATTTGCACTGGGTGTTTCGAGATTCTTGCATTTAGCATTCTGGATTATTCTGATCTATGAGACCCGAGGTGCGTATTTTGTTTCGTTTGGCTCTGGGTATTTCTGGTTCATGGCGTTTTTCATAGCAGAAATGGTTCAATCATTTATCTTGGCTGACTTCTGTTACTATTATGTGAAGAGTTTCATGCAAGGCCAGCTTAAGCTCCAAGGTCTTAACAATGGTGGAAGTTTCGCAGACTGGGTCGAAGGAGGAGGAGATAGAGCTAGATTTGGGATTGTCTATTGGGGCAGTTTCAGGAAATCGGAGAATCCGAAGCCAGTGGGAGAACCCGATTCGAAGTCCGATGGGTTTGATTGGGATCTCAAAGAACAATACCAGGCATCGCCGGAGCAACAGAGTGTTGCAGTTATGGACCCACAGAAGAAGCGTGAGATTCACGCGTTGCGGAGGCAGGAGGCGAAGAGGAAACGCGAGCAGAAGAGGGGAACAAGCAGAGGAGGGAGGAATGGGGAATGCACGAGAGAATCGGAACCCGAAGAACAACGGGTTTCCAAGAAGGAGAAAACGGGTCAGAATGGCGGATCCGAATGCTTGAACACGAAGAAGAACGTGAATCTGGATTTCAACAACACCACCGCCGTCTTGACGGCGTCGTTTCCGGTTGCGCAGGCACAGCAGCGCCCCCCTTACGCGCCTGTGCAGTACATGCCCTTCAACAACGGGTATGTTGCGTACCCCTGTATGCTACCGTGTTGGACAACGGGTGTAGATAAGAATGTGGGCGCTCAGCCGCACATTGTGGTCGCGCGCAGGGGATTCCGCCCCTTTCAGGCCGAACCGGGCCGGGTTAACCCGGGTAGTGGGTGTGAGTTGGAGCAGAATGgagaaagagatgaaaatggaGACAGAAAAGCTAAATCCAATGCCTCATCAAGCTGCAGTTCTGTGGTCTCCGATCGCCAGAGCACTTTTCACGaagGTCGGGGAAGCAGTGACAATAACAGCAATTCAGCTCAGTCCCCAGCAGAAGCCACTCAATTGAACAGTTCCAAGGAAAATAACACCATAATCCAACCCGAACAACCTTATTCTTCTGAAAAACCAAACCATATTTTGAAACAGGTAGCCGTTACACAACCCAAAGAAGAAGCCACGGTGGAAAGCAAAGCTGTTCCAATCGATCACAGTCACATGCCTAATGAAAATTCAAGCAATGGCCAAGTGAAGGAAGCCAAAACAGACATGGGAAAGCCTCCGAAGCCTCTTTCCCAAACATCTTCGCTTCCTCAAATGCCATATGTCTCCACAACAGGGGATGGACCCAATGGGAAAACAATCAACGGATTCTTATACAGATATACCAAGTCCGAGGTCAGCATTGTATGTGTCTGCCATGGAAGCACGTTCTCGCCGGCGGAGTTTGTCCAGCATGCCGGCGGCACCGACGTTTCGCATCCGTTGAGACACATTACTGTAATTCCTTCTGCCTTTGGGTG 2090 0.4737 MGRKRTSPASVLFGWVRKQSTKVKIFLGLLLVLFALVALKFTIDDHMHYFLASDAVHIVGIFVLLYKLVTHKTCSGLSLKTQELTALFLAVRLVCRVMLHVDIHVFLDLVSLLATILVICMMRFKLKSTYIKELDSLKLYYVVVPAAIFAIVIHPHSFYYWRGVIFAFCCYLEAVSVLPQLRFMQNAKMVETFTSHYVFALGVSRFLHLAFWIILIYETRGAYFVSFGSGYFWFMAFFIAEMVQSFILADFCYYYVKSFMQGQLKLQGLNNGGSFADWVEGGGDRARFGIVYWGSFRKSENPKPVGEPDSKSDGFDWDLKEQYQASPEQQSVAVMDPQKKREIHALRRQEAKRKREQKRGTSRGGRNGECTRESEPEEQRVSKKEKTGQNGGSECLNTKKNVNLDFNNTTAVLTASFPVAQAQQRPPYAPVQYMPFNNGYVAYPCMLPCWTTGVDKNVGAQPHIVVARRGFRPFQAEPGRVNPGSGCELEQNGERDENGDRKAKSNASSSCSSVVSDRQSTFHEGRGSSDNNSNSAQSPAEATQLNSSKENNTIIQPEQPYSSEKPNHILKQVAVTQPKEEATVESKAVPIDHSHMPNENSSNGQVKEAKTDMGKPPKPLSQTSSLPQMPYVSTTGDGPNGKTINGFLYRYTKSEVSIVCVCHGSTFSPAEFVQHAGGTDVSHPLRHITVIPSAFG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01183 696 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 265 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 MobiDBLite consensus disorder prediction 576 637 - -
Bva02g01183 696 MobiDBLite consensus disorder prediction 355 387 - -
Bva02g01183 696 MobiDBLite consensus disorder prediction 504 551 - -
Bva02g01183 696 Pfam Tify domain binding domain 656 689 IPR032308 -
Bva02g01183 696 MobiDBLite consensus disorder prediction 347 399 - -
Bva02g01183 696 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 265 - -
Bva02g01183 696 Pfam ER lumen protein retaining receptor 73 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 MobiDBLite consensus disorder prediction 475 551 - -
Bva02g01183 696 MobiDBLite consensus disorder prediction 617 637 - -
Bva02g01183 696 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva02g01183 696 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01183 Bva-Chr2 16057377 16062375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01183 1 267 Miscellaneous Gene Families AT3G25160 56.877 4.22e-104 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01183 - K10949 mnt:21390416 339.732