Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01065 ATGGCACACCATCAAAGGCCTTCAAGCACCCAAAGACGTTCAACTGctgtaaaagaaatttttcccAGAAACTTGGCTTCACTGTGTGGCAAATCTGTGCAACAATCAAGACTCAAGGGAAATTTTGTGATCCTGCAGAATCATCGGCAACCGGTACCTGGAAAATCAGTTTCTGTTCAGATTTACAGTGGAACAGAAGTGGATTCTAATACTGGCAAAGAGAAGTCGAGTGAACCAGCACATATTAAACATCGAAGCAGCAAGAAACATCAAGATACACAAACCATAACATATAAGATCAGAATAGATGTTGACTCCCAGTTTGGAACTCCAGGAgcttttcttataaaaaaccAACATAAAGAGAAGTTTTTTCTTCAGTATGCATCTATTGAAGCCCAAAACAATCAGATTATTCACTTTGATTGCAATTCTTGGATATACCCAATTGAGAAGACCAAATTTGGAAGACTTTTCTTCTCAAATGCTCTCTATCTTCCAAGCCAAACACCTAGAGCTTTGAAGGAACTAAGGAAAGAAGAACTTGCTAGCTTGAGGGGAAATGGAAcaggagaaagaaaggaatggGATCGAATCTACGACTACGATTTCTATAATGATCTTGCTGATCCTGATAATGGTCCTCAACATTTTAGACATGTCCTCGGTGGCTCCCAGTCATATCCATACCCTCGTAGAGTGAGGACAGGGCGACAACATAGTAAACGAGATCCATCAGCTGAGAGCAGACCACAAGCAATCAATTTGGACATATATGTTCCTTCTGATGAAAGATGCAGCCCCAGTAAATTAAAGGAActgaaatcaaattcaatcCATGCTGtcctatattttctaattccGGAGGCAAAATCCATGTTTCAACAAAGTTCAATGAGCTTTGAGTCatttgaagagatatttgaTATGTTCTCTGACAACagaaatcaaaaaattgaGGATTGGATCAAAGATAAATTGAAGAGTATGGTAGCAGATGAGCTCTACAAGGAAATAACTCATGCAAGCAAGAAAAAACCTGTGAAATTTTCCGTACCTCAAATCATATCTGAAGATGAATGGGCTTGGAGAGATGATGAAGAGTTTGCGCGACAAATACTTGCAGGAACTCACCCAGTGAGAATTAAGTGTTTGAAGAAGTTCCCACCAAAGAGCAAAACTGGAGTGTGGAGTTCAATAGAAAGATCATACATAGAAAATAAGCTTGGTGGATTCACACTACAACAGGCAATGAATCAACGGAGCTTATTCATCTTGGACCACCATGATTATCTGATGCCGTTTTTAAACAGAATAAATACAAATGGAATCTGCATATATGCTTCCAGGACGCTACTGTTCTTAAGGAATGATGGCATGCTAGAGCCAATAGCAATAGAACTTAGCTTGCCTGGTTTGCTTTTCGGAAGAGAAATCCATAAAGTCTTTCTTCCAGAAAAAGAGGGAATAAATGCAGCACTTTGGCAGCTTGCTAAGGCTCATGTTGCAGCAAATGATGCAGTTTATCATCAACTGATAAGCCATTGGTTGCATACACATGCTGTAGTTGAACCATTTATCATTGCCACCAAAAGACAGTTGAGTGTTATGCATCCAATCCACCGGCTCCTGAATCCTCATTTCAAAGATACCATGCACATAAACGCTTTGGCACGATGTATCCTCATAAACTCTGGAGGAATTCTGGAGAAGACATTATTTTCTGGTGAAGTCTCTATGGAGATATCTTCTGAGCTTTATAAAGAATGGAGATTTGATGAGCAAGGACTTCCAGCTGATCTACTCAAAAGGGGAATGGCAATAAAAGACCCAGATTTGGATAATCCCACTGGAATTGAGCTTCTCTTGCTAGATTATCCCTATGCCACTGATGGAATTGAAATATGGATCGCAATCAAGGCATGGATCAAAGACTTCTGCTCATTCTTCTACAAAACTGATGCTGCTGTCAAGTCTGATGTTGAGCTCCAAGCTTGGTGGTCAGAAATCCAGAATGTTGGCCATGGTGATAAGCGTGGAGAGACATGGTGGTATCCACTGACCACTCTATCAAACCTTGTAGAAGCATTGACAACTCTTATATGGATTGCTTCTGCTCTCCATGCATCGCTTAACTACGGCCAGTATGCATACTATGGTTACCCTCCAAACCGTCCCACACTTTGCAGAAGGTTCATTCCAGAAGAAGGAACTCTGGAATTTGGTGAGTTCCTCAAGGATCCAGACAAGTTTTTTGTCGAGATGTTACCTGAGAGATTTGAGATGAGTCTTGCTGTGGCATTAGTGGATGTTCTCTCGCGACACAGTTCTGAGGAAGTGTACCTGGGTTGCCAACCATCTTCTGCATGGACAGATAATGAAGAGGTTCAAAATAGATTTGCGGAGTTCAGTGAAGAACTAAAGGAAATTGAGAAAAGGATCTTGGAAAGAAACAGAGACCCCAAGCTGAAGAACAGACGTGGCCCTACAAAGATGGCATACACTCATTTGTATCCTGATACTTCTAGTTCTGCATCAAAAGGAGAAATCACTGGAAGAGGAATACCTAGTAGCATATCAATTTA 2585 0.3915 MAHHQRPSSTQRRSTAVKEIFPRNLASLCGKSVQQSRLKGNFVILQNHRQPVPGKSVSVQIYSGTEVDSNTGKEKSSEPAHIKHRSSKKHQDTQTITYKIRIDVDSQFGTPGAFLIKNQHKEKFFLQYASIEAQNNQIIHFDCNSWIYPIEKTKFGRLFFSNALYLPSQTPRALKELRKEELASLRGNGTGERKEWDRIYDYDFYNDLADPDNGPQHFRHVLGGSQSYPYPRRVRTGRQHSKRDPSAESRPQAINLDIYVPSDERCSPSKLKELKSNSIHAVLYFLIPEAKSMFQQSSMSFESFEEIFDMFSDNRNQKIEDWIKDKLKSMVADELYKEITHASKKKPVKFSVPQIISEDEWAWRDDEEFARQILAGTHPVRIKCLKKFPPKSKTGVWSSIERSYIENKLGGFTLQQAMNQRSLFILDHHDYLMPFLNRINTNGICIYASRTLLFLRNDGMLEPIAIELSLPGLLFGREIHKVFLPEKEGINAALWQLAKAHVAANDAVYHQLISHWLHTHAVVEPFIIATKRQLSVMHPIHRLLNPHFKDTMHINALARCILINSGGILEKTLFSGEVSMEISSELYKEWRFDEQGLPADLLKRGMAIKDPDLDNPTGIELLLLDYPYATDGIEIWIAIKAWIKDFCSFFYKTDAAVKSDVELQAWWSEIQNVGHGDKRGETWWYPLTTLSNLVEALTTLIWIASALHASLNYGQYAYYGYPPNRPTLCRRFIPEEGTLEFGEFLKDPDKFFVEMLPERFEMSLAVALVDVLSRHSSEEVYLGCQPSSAWTDNEEVQNRFAEFSEELKEIEKRILERNRDPKLKNRRGPTKMAYTHLYPDTSSSASKGEITGRGIPSSISI 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01065 861 ProSiteProfiles PLAT domain profile. 38 161 IPR001024 GO:0005515
Bva02g01065 861 Pfam Lipoxygenase 173 839 IPR013819 GO:0016702|GO:0046872
Bva02g01065 861 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 164 861 IPR013819 GO:0016702|GO:0046872
Bva02g01065 861 MobiDBLite consensus disorder prediction 66 93 - -
Bva02g01065 861 Gene3D - 488 860 - -
Bva02g01065 861 PANTHER LIPOXYGENASE 88 859 - -
Bva02g01065 861 ProSitePatterns Lipoxygenases iron-binding region signature 1. 510 524 IPR020833 GO:0016702|GO:0046872
Bva02g01065 861 SUPERFAMILY Lipoxigenase 166 861 IPR036226 -
Bva02g01065 861 SMART LH2_4 36 162 IPR001024 GO:0005515
Bva02g01065 861 Pfam PLAT/LH2 domain 62 150 IPR001024 GO:0005515
Bva02g01065 861 ProSitePatterns Lipoxygenases iron-binding region signature 2. 537 547 IPR020834 GO:0016702|GO:0046872
Bva02g01065 861 MobiDBLite consensus disorder prediction 222 252 - -
Bva02g01065 861 Gene3D PLAT/LH2 domain 18 165 - -
Bva02g01065 861 PRINTS Plant lipoxygenase signature 157 178 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 229 248 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 447 471 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 131 149 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 196 212 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 348 364 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 769 783 IPR001246 GO:0016491
Bva02g01065 861 PRINTS Plant lipoxygenase signature 298 319 IPR001246 GO:0016491
Bva02g01065 861 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 165 IPR036392 GO:0005515
Bva02g01065 861 Gene3D - 361 486 - -
Bva02g01065 861 PANTHER LIPOXYGENASE 88 859 IPR000907 GO:0016702|GO:0046872
Bva02g01065 861 MobiDBLite consensus disorder prediction 836 861 - -
Bva02g01065 861 MobiDBLite consensus disorder prediction 833 861 - -
Bva02g01065 861 Gene3D - 166 268 - -
Bva02g01065 861 Gene3D - 270 360 IPR027433 -
Bva02g01065 861 Coils Coil 793 820 - -
Bva02g01065 861 PRINTS Lipoxygenase signature 510 527 IPR013819 GO:0016702|GO:0046872
Bva02g01065 861 PRINTS Lipoxygenase signature 530 550 IPR013819 GO:0016702|GO:0046872
Bva02g01065 861 PRINTS Lipoxygenase signature 492 509 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01065 Bva-Chr2 14899178 14905671 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01065 54 861 Acyl Lipid Metabolism Gene Families AT3G22400 47.337 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01065 K00454 - gmx:100797946 1218.76